Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006523540.1
transcription initiation protein SPT3 homolog isoform X2 [Mus musculus]
...
Query length:
416 aa
DOMAINS: and other(s) domains
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transcriptional regulator SPT3
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transcriptional regulator SPT3 [Saccharomyces cerevisiae S288C]
337 aa protein
accession:NP_010680.1
transcription initiation factor TFIID subunit
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transcription initiation factor TFIID subunit [Dictyostelium discoideum AX4]
106 aa protein
accession:XP_629378.1
transcription initiation protein SPT3 homolog isoform X1
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transcription initiation protein SPT3 homolog isoform X1 [Danio rerio]
380 aa protein
accession:XP_021322818.1
transcription initiation protein SPT3 homolog isoform X3
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transcription initiation protein SPT3 homolog isoform X3 [Homo sapiens]
317 aa protein
accession:XP_047275372.1
Query: transcription initiation protein SPT3 homolog isoform X2
...
transcription initiation protein SPT3 homolog isoform X2 [Mus musculus]
416 aa protein
accession:XP_006523540.1
transcription initiation protein SPT3 homolog isoform X2
...
transcription initiation protein SPT3 homolog isoform X2 [Rattus norvegicus]
374 aa protein
accession:XP_063123812.1
DOMAINS: and other(s) domains
...
transcriptional regulator SPT3 [Saccharomyces cerevisiae S288C]
337 aa protein
accession:NP_010680.1
transcription initiation factor TFIID subunit [Dictyostelium discoideum AX4]
106 aa protein
accession:XP_629378.1
transcription initiation protein SPT3 homolog isoform X1 [Danio rerio]
380 aa protein
accession:XP_021322818.1
transcription initiation protein SPT3 homolog isoform X3 [Homo sapiens]
317 aa protein
accession:XP_047275372.1
transcription initiation protein SPT3 homolog isoform X2 [Mus musculus]
416 aa protein
accession:XP_006523540.1
transcription initiation protein SPT3 homolog isoform X2 [Rattus norvegicus]
374 aa protein
accession:XP_063123812.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 736 | 736 | 86% | 0.0 | 98.61% | XP_063123812.1 | |
| 2 | 510 | 595 | 74% | 0.0 | 90.74% | XP_047275372.1 | |
| 3 | 491 | 491 | 86% | 5e-173 | 67.31% | XP_021322818.1 | |
| 4 | 105 | 105 | 62% | 2e-24 | 28.38% | NP_010680.1 | |
| 5 | 65.1 | 65.1 | 21% | 4e-12 | 38.89% | XP_629378.1 |