Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_006526180.1 E3 ubiquitin-protein ligase RNF138 isoform X2 [Mus musculus] ... Query length: 226 aa

DNA/RNA helicase protein ...

DNA/RNA helicase protein [Arabidopsis thaliana]

881 aa protein

accession:NP_196132.3

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF166 ...

E3 ubiquitin-protein ligase RNF166 [Danio rerio]

242 aa protein

accession:XP_009301765.1

Alignment Sequence Identical proteins

potassium channel modulatory factor 1, isoform E ...

potassium channel modulatory factor 1, isoform E [Drosophila melanogaster]

599 aa protein

accession:NP_001163560.1

Alignment Sequence Identical proteins

Query: E3 ubiquitin-protein ligase RNF138 isoform X2 ...

E3 ubiquitin-protein ligase RNF138 isoform X2 [Mus musculus]

226 aa protein

accession:XP_006526180.1

Sequence Identical proteins

E3 ubiquitin-protein ligase RNF138 isoform 1 ...

E3 ubiquitin-protein ligase RNF138 isoform 1 [Homo sapiens]

245 aa protein

accession:NP_001178253.2

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF138 isoform 1 ...

E3 ubiquitin-protein ligase RNF138 isoform 1 [Mus musculus]

245 aa protein

accession:NP_997506.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_997506.1\|	E3 ubiquitin-protein ligase RNF138 isoform 1 [Mus musculus]	463	463	100%	5e-167	92.24%	NP_997506.1
2 Select seq ref\|NP_001178253.2\|	E3 ubiquitin-protein ligase RNF138 isoform 1 [Homo sapiens]	446	446	100%	3e-160	86.94%	NP_001178253.2
3 Select seq ref\|XP_009301765.1\|	E3 ubiquitin-protein ligase RNF166 [Danio rerio]	149	149	94%	4e-43	35.98%	XP_009301765.1
4 Select seq ref\|NP_001163560.1\|	potassium channel modulatory factor 1, isoform E [Drosophila melanogaster]	60.5	60.5	32%	2e-09	35.14%	NP_001163560.1
5 Select seq ref\|NP_196132.3\|	DNA/RNA helicase protein [Arabidopsis thaliana]	53.5	53.5	23%	5e-07	42.31%	NP_196132.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments