Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006530842.1
MHC class II regulatory factor RFX1 isoform X3 [Mus musculus]
...
Query length:
1020 aa
DOMAINS: and other(s) domains
...
MHC class II regulatory factor RFX1a isoform X6
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MHC class II regulatory factor RFX1a isoform X6 [Danio rerio]
891 aa protein
accession:XP_005163908.1
MHC class II regulatory factor RFX1 isoform X1
...
MHC class II regulatory factor RFX1 isoform X1 [Homo sapiens]
1089 aa protein
accession:XP_011526468.1
MHC class II regulatory factor RFX1 isoform X2
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MHC class II regulatory factor RFX1 isoform X2 [Mus musculus]
1064 aa protein
accession:XP_006530841.1
MHC class II regulatory factor RFX1 isoform X1
...
MHC class II regulatory factor RFX1 isoform X1 [Mus musculus]
1073 aa protein
accession:XP_011246631.1
Query: MHC class II regulatory factor RFX1 isoform X3
...
MHC class II regulatory factor RFX1 isoform X3 [Mus musculus]
1020 aa protein
accession:XP_006530842.1
MHC class II regulatory factor RFX1 isoform X6
...
MHC class II regulatory factor RFX1 isoform X6 [Mus musculus]
963 aa protein
accession:XP_030099222.1
DOMAINS: and other(s) domains
...
MHC class II regulatory factor RFX1a isoform X6 [Danio rerio]
891 aa protein
accession:XP_005163908.1
MHC class II regulatory factor RFX1 isoform X1 [Homo sapiens]
1089 aa protein
accession:XP_011526468.1
MHC class II regulatory factor RFX1 isoform X2 [Mus musculus]
1064 aa protein
accession:XP_006530841.1
MHC class II regulatory factor RFX1 isoform X1 [Mus musculus]
1073 aa protein
accession:XP_011246631.1
MHC class II regulatory factor RFX1 isoform X3 [Mus musculus]
1020 aa protein
accession:XP_006530842.1
MHC class II regulatory factor RFX1 isoform X6 [Mus musculus]
963 aa protein
accession:XP_030099222.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2053 | 2053 | 99% | 0.0 | 100.00% | XP_011246631.1 | |
| 2 | 1597 | 1597 | 95% | 0.0 | 89.53% | XP_011526468.1 | |
| 3 | 998 | 1048 | 71% | 0.0 | 75.00% | XP_005163908.1 | |
| 4 | 2026 | 2026 | 99% | 0.0 | 99.12% | XP_006530841.1 | |
| 5 | 1905 | 1905 | 93% | 0.0 | 100.00% | XP_030099222.1 |