Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_008001505.2
nuclear receptor subfamily 4 group A member 1 isoform X1 [Chlorocebus sabaeus]
...
Query length:
710 aa
DOMAINS: and other(s) domains
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retinoic acid receptor RXR-beta isoform 3
...
retinoic acid receptor RXR-beta isoform 3 [Homo sapiens]
347 aa protein
accession:NP_001278918.1
Nuclear hormone receptor family member nhr-6
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Nuclear hormone receptor family member nhr-6 [Caenorhabditis elegans]
483 aa protein
accession:NP_001379487.1
nuclear receptor subfamily 4immunitygroup A member 1
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nuclear receptor subfamily 4immunitygroup A member 1 [Danio rerio]
574 aa protein
accession:NP_001002173.1
Query: nuclear receptor subfamily 4 group A member 1 isoform X1
...
nuclear receptor subfamily 4 group A member 1 isoform X1 [Chlorocebus sabaeus]
710 aa protein
accession:XP_008001505.2
nuclear receptor subfamily 4 group A member 1
...
nuclear receptor subfamily 4 group A member 1 [Mus musculus]
601 aa protein
accession:NP_001398182.1
nuclear receptor subfamily 4 group A member 1 isoform X1
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nuclear receptor subfamily 4 group A member 1 isoform X1 [Rattus norvegicus]
597 aa protein
accession:XP_063120357.1
DOMAINS: and other(s) domains
...
retinoic acid receptor RXR-beta isoform 3 [Homo sapiens]
347 aa protein
accession:NP_001278918.1
Nuclear hormone receptor family member nhr-6 [Caenorhabditis elegans]
483 aa protein
accession:NP_001379487.1
nuclear receptor subfamily 4immunitygroup A member 1 [Danio rerio]
574 aa protein
accession:NP_001002173.1
nuclear receptor subfamily 4 group A member 1 isoform X1 [Chlorocebus sabaeus]
710 aa protein
accession:XP_008001505.2
nuclear receptor subfamily 4 group A member 1 [Mus musculus]
601 aa protein
accession:NP_001398182.1
nuclear receptor subfamily 4 group A member 1 isoform X1 [Rattus norvegicus]
597 aa protein
accession:XP_063120357.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 986 | 986 | 89% | 0.0 | 84.87% | NP_001398182.1 | |
| 2 | 979 | 979 | 89% | 0.0 | 84.66% | XP_063120357.1 | |
| 3 | 629 | 629 | 89% | 0.0 | 54.25% | NP_001002173.1 | |
| 4 | 173 | 173 | 53% | 6e-46 | 33.17% | NP_001379487.1 | |
| 5 | 156 | 156 | 53% | 3e-41 | 29.82% | NP_001278918.1 |