Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_010319718.1
putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Solanum lycopersicum]
...
Query length:
1482 aa
DOMAINS: and other(s) domains
...
Transducin/WD40 repeat-like superfamily protein
...
Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
1264 aa protein
accession:NP_001189833.1
putative E3 ubiquitin-protein ligase LIN-1 isoform X1
...
putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Glycine max]
1304 aa protein
accession:XP_006597728.1
putative E3 ubiquitin-protein ligase LIN
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putative E3 ubiquitin-protein ligase LIN [Glycine max]
1333 aa protein
accession:XP_006584821.1
putative E3 ubiquitin-protein ligase LIN-1
...
putative E3 ubiquitin-protein ligase LIN-1 [Glycine max]
1151 aa protein
accession:XP_006580471.2
Query: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
...
putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Solanum lycopersicum]
1482 aa protein
accession:XP_010319718.1
putative E3 ubiquitin-protein ligase LIN-1
...
putative E3 ubiquitin-protein ligase LIN-1 [Glycine max]
1481 aa protein
accession:XP_003536276.1
DOMAINS: and other(s) domains
...
Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
1264 aa protein
accession:NP_001189833.1
putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Glycine max]
1304 aa protein
accession:XP_006597728.1
putative E3 ubiquitin-protein ligase LIN [Glycine max]
1333 aa protein
accession:XP_006584821.1
putative E3 ubiquitin-protein ligase LIN-1 [Glycine max]
1151 aa protein
accession:XP_006580471.2
putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Solanum lycopersicum]
1482 aa protein
accession:XP_010319718.1
putative E3 ubiquitin-protein ligase LIN-1 [Glycine max]
1481 aa protein
accession:XP_003536276.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1835 | 1835 | 100% | 0.0 | 61.01% | XP_003536276.1 | |
| 2 | 226 | 311 | 64% | 1e-58 | 25.12% | NP_001189833.1 | |
| 3 | 726 | 726 | 66% | 0.0 | 41.84% | XP_006584821.1 | |
| 4 | 725 | 725 | 66% | 0.0 | 42.67% | XP_006580471.2 | |
| 5 | 258 | 356 | 65% | 1e-68 | 26.58% | XP_006597728.1 |