Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011242484.1
transcription factor IIIB 90 kDa subunit isoform X3 [Mus musculus]
...
Query length:
542 aa
DOMAINS: and other(s) domains
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transcription factor IIIb subunit, putative
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transcription factor IIIb subunit, putative [Plasmodium falciparum 3D7]
684 aa protein
accession:XP_001348643.2
transcription factor TFIIIB subunit Brf1
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transcription factor TFIIIB subunit Brf1 [Schizosaccharomyces pombe]
492 aa protein
accession:NP_001342959.1
transcription factor TFIIIB subunit BRF1
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transcription factor TFIIIB subunit BRF1 [Saccharomyces cerevisiae S288C]
596 aa protein
accession:NP_011762.1
BRF1 general transcription factor IIIB subunit b
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BRF1 general transcription factor IIIB subunit b [Danio rerio]
693 aa protein
accession:NP_956183.1
Query: transcription factor IIIB 90 kDa subunit isoform X3
...
transcription factor IIIB 90 kDa subunit isoform X3 [Mus musculus]
542 aa protein
accession:XP_011242484.1
transcription factor IIIB 90 kDa subunit isoform X8
...
transcription factor IIIB 90 kDa subunit isoform X8 [Homo sapiens]
506 aa protein
accession:XP_047287262.1
DOMAINS: and other(s) domains
...
transcription factor IIIb subunit, putative [Plasmodium falciparum 3D7]
684 aa protein
accession:XP_001348643.2
transcription factor TFIIIB subunit Brf1 [Schizosaccharomyces pombe]
492 aa protein
accession:NP_001342959.1
transcription factor TFIIIB subunit BRF1 [Saccharomyces cerevisiae S288C]
596 aa protein
accession:NP_011762.1
BRF1 general transcription factor IIIB subunit b [Danio rerio]
693 aa protein
accession:NP_956183.1
transcription factor IIIB 90 kDa subunit isoform X3 [Mus musculus]
542 aa protein
accession:XP_011242484.1
transcription factor IIIB 90 kDa subunit isoform X8 [Homo sapiens]
506 aa protein
accession:XP_047287262.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 811 | 811 | 92% | 0.0 | 86.60% | XP_047287262.1 | |
| 2 | 558 | 558 | 95% | 0.0 | 59.81% | NP_956183.1 | |
| 3 | 153 | 153 | 26% | 7e-40 | 55.63% | NP_001342959.1 | |
| 4 | 141 | 141 | 62% | 4e-35 | 28.57% | NP_011762.1 | |
| 5 | 133 | 133 | 24% | 5e-32 | 47.37% | XP_001348643.2 |