Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011316696.1
mRNA 3'-end-processing protein yth-1 [Fusarium graminearum PH-1]
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Query length:
255 aa
DOMAINS: and other(s) domains
...
cleavage polyadenylation factor RNA-binding subunit YTH1
...
cleavage polyadenylation factor RNA-binding subunit YTH1 [Saccharomyces cerevisiae S288C]
208 aa protein
accession:NP_015432.1
Query: mRNA 3'-end-processing protein yth-1
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mRNA 3'-end-processing protein yth-1 [Fusarium graminearum PH-1]
255 aa protein
accession:XP_011316696.1
cleavage and polyadenylation specificity factor complex subunit Yth1
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cleavage and polyadenylation specificity factor complex subunit Yth1 [Schizosaccharomyces pombe]
170 aa protein
accession:NP_592962.1
cleavage and polyadenylation specificity factor subunit 4 isoform 1
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cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Homo sapiens]
269 aa protein
accession:NP_006684.1
cleavage and polyadenylation specificity factor subunit 4 isoform d
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cleavage and polyadenylation specificity factor subunit 4 isoform d [Mus musculus]
269 aa protein
accession:NP_001361645.1
cleavage and polyadenylation specificity factor subunit 4 isoform X1
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cleavage and polyadenylation specificity factor subunit 4 isoform X1 [Danio rerio]
270 aa protein
accession:XP_021324974.1
DOMAINS: and other(s) domains
...
cleavage polyadenylation factor RNA-binding subunit YTH1 [Saccharomyces cerevisiae S288C]
208 aa protein
accession:NP_015432.1
mRNA 3'-end-processing protein yth-1 [Fusarium graminearum PH-1]
255 aa protein
accession:XP_011316696.1
cleavage and polyadenylation specificity factor complex subunit Yth1 [Schizosaccharomyces pombe]
170 aa protein
accession:NP_592962.1
cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Homo sapiens]
269 aa protein
accession:NP_006684.1
cleavage and polyadenylation specificity factor subunit 4 isoform d [Mus musculus]
269 aa protein
accession:NP_001361645.1
cleavage and polyadenylation specificity factor subunit 4 isoform X1 [Danio rerio]
270 aa protein
accession:XP_021324974.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 189 | 189 | 82% | 5e-59 | 43.46% | NP_015432.1 | |
| 2 | 154 | 154 | 70% | 1e-45 | 48.62% | NP_592962.1 | |
| 3 | 155 | 155 | 55% | 4e-45 | 54.61% | NP_006684.1 | |
| 4 | 155 | 155 | 55% | 4e-45 | 54.61% | NP_001361645.1 | |
| 5 | 154 | 154 | 68% | 1e-44 | 45.45% | XP_021324974.1 |