Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011352543.1
potassium voltage-gated channel protein Shaker isoform X4 [Ooceraea biroi]
...
Query length:
563 aa
DOMAINS: and other(s) domains
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A-type voltage-gated potassium channel KCND1
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A-type voltage-gated potassium channel KCND1 [Homo sapiens]
647 aa protein
accession:NP_004970.3
potassium voltage-gated channel subfamily A member 6
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potassium voltage-gated channel subfamily A member 6 [Mus musculus]
529 aa protein
accession:NP_001397001.1
potassium voltage-gated channel subfamily A member 6 isoform X1
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potassium voltage-gated channel subfamily A member 6 isoform X1 [Rattus norvegicus]
530 aa protein
accession:XP_063142734.1
potassium voltage-gated channel subfamily A member 3
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potassium voltage-gated channel subfamily A member 3 [Danio rerio]
515 aa protein
accession:XP_021332959.1
Query: potassium voltage-gated channel protein Shaker isoform X4
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potassium voltage-gated channel protein Shaker isoform X4 [Ooceraea biroi]
563 aa protein
accession:XP_011352543.1
shaker, isoform T
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shaker, isoform T [Drosophila melanogaster]
655 aa protein
accession:NP_001303569.1
DOMAINS: and other(s) domains
...
A-type voltage-gated potassium channel KCND1 [Homo sapiens]
647 aa protein
accession:NP_004970.3
potassium voltage-gated channel subfamily A member 6 [Mus musculus]
529 aa protein
accession:NP_001397001.1
potassium voltage-gated channel subfamily A member 6 isoform X1 [Rattus norvegicus]
530 aa protein
accession:XP_063142734.1
potassium voltage-gated channel subfamily A member 3 [Danio rerio]
515 aa protein
accession:XP_021332959.1
potassium voltage-gated channel protein Shaker isoform X4 [Ooceraea biroi]
563 aa protein
accession:XP_011352543.1
shaker, isoform T [Drosophila melanogaster]
655 aa protein
accession:NP_001303569.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 879 | 879 | 83% | 0.0 | 91.77% | NP_001303569.1 | |
| 2 | 642 | 642 | 83% | 0.0 | 69.34% | XP_021332959.1 | |
| 3 | 583 | 583 | 76% | 0.0 | 65.12% | NP_001397001.1 | |
| 4 | 582 | 582 | 76% | 0.0 | 65.05% | XP_063142734.1 | |
| 5 | 279 | 279 | 71% | 6e-85 | 38.33% | NP_004970.3 |