Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011525543.1
U1 small nuclear ribonucleoprotein 70 kDa isoform X2 [Homo sapiens]
...
Query length:
122 aa
DOMAINS: and other(s) domains
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asparagine-rich antigen Pfa35-2
...
asparagine-rich antigen Pfa35-2 [Plasmodium falciparum 3D7]
3063 aa protein
accession:XP_001350988.1
collagen alpha-1(XIV) chain isoform X4
...
collagen alpha-1(XIV) chain isoform X4 [Danio rerio]
1796 aa protein
accession:XP_009290438.1
U2 snRNP auxilliary factor, large subunit, splicing factor
...
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
565 aa protein
accession:NP_974695.1
U1 small nuclear ribonucleoprotein 70 kDa isoform X1
...
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Homo sapiens]
345 aa protein
accession:XP_011525542.2
Query: U1 small nuclear ribonucleoprotein 70 kDa isoform X2
...
U1 small nuclear ribonucleoprotein 70 kDa isoform X2 [Homo sapiens]
122 aa protein
accession:XP_011525543.1
U1 small nuclear ribonucleoprotein 70 kDa
...
U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
448 aa protein
accession:NP_033250.3
DOMAINS: and other(s) domains
...
asparagine-rich antigen Pfa35-2 [Plasmodium falciparum 3D7]
3063 aa protein
accession:XP_001350988.1
collagen alpha-1(XIV) chain isoform X4 [Danio rerio]
1796 aa protein
accession:XP_009290438.1
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
565 aa protein
accession:NP_974695.1
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Homo sapiens]
345 aa protein
accession:XP_011525542.2
U1 small nuclear ribonucleoprotein 70 kDa isoform X2 [Homo sapiens]
122 aa protein
accession:XP_011525543.1
U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
448 aa protein
accession:NP_033250.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 228 | 228 | 100% | 1e-74 | 100.00% | XP_011525542.2 | |
| 2 | 132 | 132 | 100% | 2e-36 | 86.99% | NP_033250.3 | |
| 3 | 37.7 | 37.7 | 59% | 0.018 | 22.08% | XP_001350988.1 | |
| 4 | 35.0 | 35.0 | 34% | 0.14 | 44.19% | XP_009290438.1 | |
| 5 | 33.9 | 33.9 | 41% | 0.30 | 44.83% | NP_974695.1 |