Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011530109.1
CCR4-NOT transcription complex subunit 6-like isoform X2 [Homo sapiens]
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Query length:
594 aa
DOMAINS: and other(s) domains
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CCR4-Not complex subunit Ccr4
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CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
poly(A)-specific ribonuclease
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poly(A)-specific ribonuclease [Caenorhabditis elegans]
597 aa protein
accession:NP_001379313.1
CCR4-NOT transcription complex subunit 6-like
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CCR4-NOT transcription complex subunit 6-like [Danio rerio]
559 aa protein
accession:NP_001018474.1
CCR4-NOT transcription complex subunit 6-like isoform X2
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CCR4-NOT transcription complex subunit 6-like isoform X2 [Rattus norvegicus]
550 aa protein
accession:XP_063129404.1
Query: CCR4-NOT transcription complex subunit 6-like isoform X2
...
CCR4-NOT transcription complex subunit 6-like isoform X2 [Homo sapiens]
594 aa protein
accession:XP_011530109.1
CCR4-NOT transcription complex subunit 6-like isoform X6
...
CCR4-NOT transcription complex subunit 6-like isoform X6 [Homo sapiens]
550 aa protein
accession:XP_047305919.1
DOMAINS: and other(s) domains
...
CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
poly(A)-specific ribonuclease [Caenorhabditis elegans]
597 aa protein
accession:NP_001379313.1
CCR4-NOT transcription complex subunit 6-like [Danio rerio]
559 aa protein
accession:NP_001018474.1
CCR4-NOT transcription complex subunit 6-like isoform X2 [Rattus norvegicus]
550 aa protein
accession:XP_063129404.1
CCR4-NOT transcription complex subunit 6-like isoform X2 [Homo sapiens]
594 aa protein
accession:XP_011530109.1
CCR4-NOT transcription complex subunit 6-like isoform X6 [Homo sapiens]
550 aa protein
accession:XP_047305919.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1144 | 1144 | 92% | 0.0 | 100.00% | XP_047305919.1 | |
| 2 | 1122 | 1122 | 92% | 0.0 | 98.00% | XP_063129404.1 | |
| 3 | 955 | 955 | 92% | 0.0 | 83.97% | NP_001018474.1 | |
| 4 | 570 | 570 | 88% | 0.0 | 51.61% | NP_001379313.1 | |
| 5 | 385 | 385 | 86% | 5e-125 | 40.07% | NP_587901.1 |