Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_011533475.1 replication factor C subunit 3 isoform X3 [Homo sapiens] ... Query length: 298 aa

replication factor C subunit 5 ...

replication factor C subunit 5 [Saccharomyces cerevisiae S288C]

354 aa protein

accession:NP_009644.3

Alignment Sequence Identical proteins

replication factor C 38kD subunit, isoform B ...

replication factor C 38kD subunit, isoform B [Drosophila melanogaster]

356 aa protein

accession:NP_001285833.1

Alignment Sequence Identical proteins

replication factor C subunit 3 ...

replication factor C subunit 3 [Danio rerio]

356 aa protein

accession:NP_958865.1

Alignment Sequence Identical proteins

replication factor C subunit 3 isoform 2 ...

replication factor C subunit 3 isoform 2 [Mus musculus]

348 aa protein

accession:NP_001404623.1

Alignment Sequence Identical proteins

Query: replication factor C subunit 3 isoform X3 ...

replication factor C subunit 3 isoform X3 [Homo sapiens]

298 aa protein

accession:XP_011533475.1

Sequence Identical proteins

replication factor C subunit 3 isoform X2 ...

replication factor C subunit 3 isoform X2 [Homo sapiens]

313 aa protein

accession:XP_047286445.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047286445.1\|	replication factor C subunit 3 isoform X2 [Homo sapiens]	608	608	98%	0.0	100.00%	XP_047286445.1
2 Select seq ref\|NP_001404623.1\|	replication factor C subunit 3 isoform 2 [Mus musculus]	531	531	92%	0.0	94.55%	NP_001404623.1
3 Select seq ref\|NP_958865.1\|	replication factor C subunit 3 [Danio rerio]	518	518	98%	0.0	85.67%	NP_958865.1
4 Select seq ref\|NP_001285833.1\|	replication factor C 38kD subunit, isoform B [Drosophila melanogaster]	406	406	98%	6e-142	61.77%	NP_001285833.1
5 Select seq ref\|NP_009644.3\|	replication factor C subunit 5 [Saccharomyces cerevisiae S288C]	263	263	98%	6e-86	45.18%	NP_009644.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments