Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011541270.1
short transient receptor potential channel 6 isoform X1 [Homo sapiens]
...
Query length:
876 aa
DOMAINS: and other(s) domains
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transient receptor potential cation channel gamma, isoform D
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transient receptor potential cation channel gamma, isoform D [Drosophila melanogaster]
1188 aa protein
accession:NP_001137830.2
short transient receptor potential channel 7b
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short transient receptor potential channel 7b [Danio rerio]
844 aa protein
accession:NP_001276815.1
short transient receptor potential channel 6 isoform 1
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short transient receptor potential channel 6 isoform 1 [Mus musculus]
930 aa protein
accession:NP_038866.2
short transient receptor potential channel 6 isoform X2
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short transient receptor potential channel 6 isoform X2 [Homo sapiens]
845 aa protein
accession:XP_047283465.1
Query: short transient receptor potential channel 6 isoform X1
...
short transient receptor potential channel 6 isoform X1 [Homo sapiens]
876 aa protein
accession:XP_011541270.1
short transient receptor potential channel 6
...
short transient receptor potential channel 6 [Homo sapiens]
931 aa protein
accession:NP_004612.2
DOMAINS: and other(s) domains
...
transient receptor potential cation channel gamma, isoform D [Drosophila melanogaster]
1188 aa protein
accession:NP_001137830.2
short transient receptor potential channel 7b [Danio rerio]
844 aa protein
accession:NP_001276815.1
short transient receptor potential channel 6 isoform 1 [Mus musculus]
930 aa protein
accession:NP_038866.2
short transient receptor potential channel 6 isoform X2 [Homo sapiens]
845 aa protein
accession:XP_047283465.1
short transient receptor potential channel 6 isoform X1 [Homo sapiens]
876 aa protein
accession:XP_011541270.1
short transient receptor potential channel 6 [Homo sapiens]
931 aa protein
accession:NP_004612.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1809 | 1809 | 99% | 0.0 | 100.00% | NP_004612.2 | |
| 2 | 1707 | 1707 | 99% | 0.0 | 94.97% | NP_038866.2 | |
| 3 | 1311 | 1311 | 97% | 0.0 | 73.36% | NP_001276815.1 | |
| 4 | 558 | 558 | 92% | 0.0 | 38.43% | NP_001137830.2 | |
| 5 | 1752 | 1752 | 96% | 0.0 | 100.00% | XP_047283465.1 |