Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_013752615.1
DNA-directed RNA polymerase II polypeptide [Thecamonas trahens ATCC 50062]
...
Query length:
212 aa
DOMAINS: and other(s) domains
...
Query: DNA-directed RNA polymerase II polypeptide
...
DNA-directed RNA polymerase II polypeptide [Thecamonas trahens ATCC 50062]
212 aa protein
accession:XP_013752615.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
RNA polymerase II, I and III subunit E, isoform B
...
RNA polymerase II, I and III subunit E, isoform B [Drosophila melanogaster]
210 aa protein
accession:NP_001260878.1
Eukaryotic rpb5 RNA polymerase subunit family protein
...
Eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis thaliana]
205 aa protein
accession:NP_188871.1
DNA-directed RNA polymerases II and IV subunit 5A-like
...
DNA-directed RNA polymerases II and IV subunit 5A-like [Glycine max]
206 aa protein
accession:NP_001238044.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase II polypeptide [Thecamonas trahens ATCC 50062]
212 aa protein
accession:XP_013752615.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
RNA polymerase II, I and III subunit E, isoform B [Drosophila melanogaster]
210 aa protein
accession:NP_001260878.1
Eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis thaliana]
205 aa protein
accession:NP_188871.1
DNA-directed RNA polymerases II and IV subunit 5A-like [Glycine max]
206 aa protein
accession:NP_001238044.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 200 | 200 | 100% | 6e-64 | 47.47% | NP_491961.1 | |
| 2 | 190 | 190 | 98% | 5e-60 | 43.33% | NP_188871.1 | |
| 3 | 188 | 188 | 100% | 3e-59 | 44.65% | NP_001238044.1 | |
| 4 | 187 | 187 | 98% | 9e-59 | 47.22% | NP_001003564.1 | |
| 5 | 184 | 184 | 98% | 2e-57 | 45.79% | NP_001260878.1 |