Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_015116166.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 [Diachasma alloeum]
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Query length:
151 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase core subunit RPB8
...
DNA-directed RNA polymerase core subunit RPB8 [Saccharomyces cerevisiae S288C]
146 aa protein
accession:NP_014867.1
RNA polymerase II core subunit
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RNA polymerase II core subunit [Dictyostelium discoideum AX4]
142 aa protein
accession:XP_642084.1
uncharacterized protein LOC100816388 isoform X1
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uncharacterized protein LOC100816388 isoform X1 [Glycine max]
145 aa protein
accession:XP_025979395.1
Query: DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 [Diachasma alloeum]
151 aa protein
accession:XP_015116166.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
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DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Rattus norvegicus]
151 aa protein
accession:XP_038953305.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2
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DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2 [Mus musculus]
114 aa protein
accession:NP_001404166.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase core subunit RPB8 [Saccharomyces cerevisiae S288C]
146 aa protein
accession:NP_014867.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
142 aa protein
accession:XP_642084.1
uncharacterized protein LOC100816388 isoform X1 [Glycine max]
145 aa protein
accession:XP_025979395.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 [Diachasma alloeum]
151 aa protein
accession:XP_015116166.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Rattus norvegicus]
151 aa protein
accession:XP_038953305.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2 [Mus musculus]
114 aa protein
accession:NP_001404166.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 206 | 206 | 99% | 2e-68 | 71.33% | XP_038953305.1 | |
| 2 | 166 | 166 | 76% | 2e-53 | 71.30% | NP_001404166.1 | |
| 3 | 133 | 133 | 96% | 6e-40 | 48.63% | XP_025979395.1 | |
| 4 | 130 | 130 | 98% | 1e-38 | 45.27% | XP_642084.1 | |
| 5 | 83.2 | 83.2 | 98% | 4e-20 | 33.12% | NP_014867.1 |