Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_015626158.1
general transcription and DNA repair factor IIH subunit TFB4 [Oryza sativa Japonica Group]
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Query length:
289 aa
DOMAINS: and other(s) domains
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general transcription factor IIH subunit 3
...
general transcription factor IIH subunit 3 [Rattus norvegicus]
309 aa protein
accession:NP_001019407.1
general transcription factor IIH subunit 3 isoform a
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general transcription factor IIH subunit 3 isoform a [Homo sapiens]
308 aa protein
accession:NP_001507.2
general transcription factor IIH subunit 3
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general transcription factor IIH subunit 3 [Mus musculus]
309 aa protein
accession:NP_852075.1
Query: general transcription and DNA repair factor IIH subunit TFB4
...
general transcription and DNA repair factor IIH subunit TFB4 [Oryza sativa Japonica Group]
289 aa protein
accession:XP_015626158.1
basal transcription factor complex subunit-like protein
...
basal transcription factor complex subunit-like protein [Arabidopsis thaliana]
301 aa protein
accession:NP_564050.1
general transcription and DNA repair factor IIH subunit TFB4 isoform X1
...
general transcription and DNA repair factor IIH subunit TFB4 isoform X1 [Glycine max]
294 aa protein
accession:XP_003523449.1
DOMAINS: and other(s) domains
...
general transcription factor IIH subunit 3 [Rattus norvegicus]
309 aa protein
accession:NP_001019407.1
general transcription factor IIH subunit 3 isoform a [Homo sapiens]
308 aa protein
accession:NP_001507.2
general transcription factor IIH subunit 3 [Mus musculus]
309 aa protein
accession:NP_852075.1
general transcription and DNA repair factor IIH subunit TFB4 [Oryza sativa Japonica Group]
289 aa protein
accession:XP_015626158.1
basal transcription factor complex subunit-like protein [Arabidopsis thaliana]
301 aa protein
accession:NP_564050.1
general transcription and DNA repair factor IIH subunit TFB4 isoform X1 [Glycine max]
294 aa protein
accession:XP_003523449.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 363 | 363 | 99% | 1e-125 | 62.80% | NP_564050.1 | |
| 2 | 357 | 357 | 99% | 4e-123 | 61.17% | XP_003523449.1 | |
| 3 | 187 | 187 | 94% | 2e-56 | 34.92% | NP_001019407.1 | |
| 4 | 187 | 187 | 94% | 2e-56 | 35.25% | NP_852075.1 | |
| 5 | 183 | 183 | 94% | 7e-55 | 35.03% | NP_001507.2 |