Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_017447915.1
trans-Golgi network integral membrane protein TGN38 isoform X2 [Rattus norvegicus]
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Query length:
386 aa
DOMAINS: and other(s) domains
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conserved Plasmodium protein, unknown function
...
conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7]
3381 aa protein
accession:XP_001350208.1
trans-Golgi network integral membrane protein 2 isoform 1 precursor
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trans-Golgi network integral membrane protein 2 isoform 1 precursor [Homo sapiens]
437 aa protein
accession:NP_006455.2
trans-Golgi network integral membrane protein 2 isoform 3 precursor
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trans-Golgi network integral membrane protein 2 isoform 3 precursor [Homo sapiens]
453 aa protein
accession:NP_001193770.1
trans-Golgi network integral membrane protein 2 isoform 6 precursor
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trans-Golgi network integral membrane protein 2 isoform 6 precursor [Homo sapiens]
453 aa protein
accession:NP_001355025.1
Query: trans-Golgi network integral membrane protein TGN38 isoform X2
...
trans-Golgi network integral membrane protein TGN38 isoform X2 [Rattus norvegicus]
386 aa protein
accession:XP_017447915.1
trans-Golgi network integral membrane protein 2 isoform 5 precursor
...
trans-Golgi network integral membrane protein 2 isoform 5 precursor [Homo sapiens]
454 aa protein
accession:NP_001355024.1
DOMAINS: and other(s) domains
...
conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7]
3381 aa protein
accession:XP_001350208.1
trans-Golgi network integral membrane protein 2 isoform 1 precursor [Homo sapiens]
437 aa protein
accession:NP_006455.2
trans-Golgi network integral membrane protein 2 isoform 3 precursor [Homo sapiens]
453 aa protein
accession:NP_001193770.1
trans-Golgi network integral membrane protein 2 isoform 6 precursor [Homo sapiens]
453 aa protein
accession:NP_001355025.1
trans-Golgi network integral membrane protein TGN38 isoform X2 [Rattus norvegicus]
386 aa protein
accession:XP_017447915.1
trans-Golgi network integral membrane protein 2 isoform 5 precursor [Homo sapiens]
454 aa protein
accession:NP_001355024.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 218 | 218 | 48% | 4e-66 | 63.98% | NP_006455.2 | |
| 2 | 37.4 | 73.9 | 13% | 0.12 | 40.00% | XP_001350208.1 | |
| 3 | 218 | 218 | 49% | 4e-66 | 62.63% | NP_001355024.1 | |
| 4 | 218 | 218 | 48% | 7e-66 | 63.98% | NP_001193770.1 | |
| 5 | 218 | 218 | 48% | 8e-66 | 63.98% | NP_001355025.1 |