Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_019617365.1
PREDICTED: probable small nuclear ribonucleoprotein Sm D2 [Branchiostoma belcheri]
...
Query length:
116 aa
DOMAINS: and other(s) domains
...
small nuclear ribonucleoprotein Sm D2, putative
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small nuclear ribonucleoprotein Sm D2, putative [Plasmodium falciparum 3D7]
101 aa protein
accession:XP_001349689.1
Sm snRNP core protein Smd2
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Sm snRNP core protein Smd2 [Schizosaccharomyces pombe]
115 aa protein
accession:NP_594506.1
Query: PREDICTED: probable small nuclear ribonucleoprotein Sm D2
...
PREDICTED: probable small nuclear ribonucleoprotein Sm D2 [Branchiostoma belcheri]
116 aa protein
accession:XP_019617365.1
small nuclear ribonucleoprotein Sm D2
...
small nuclear ribonucleoprotein Sm D2 [Danio rerio]
118 aa protein
accession:NP_001017582.1
small nuclear ribonucleoprotein Sm D2 isoform X1
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small nuclear ribonucleoprotein Sm D2 isoform X1 [Rattus norvegicus]
118 aa protein
accession:XP_063129695.1
small nuclear ribonucleoprotein Sm D2-like
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small nuclear ribonucleoprotein Sm D2-like [Mus musculus]
118 aa protein
accession:XP_036019390.1
DOMAINS: and other(s) domains
...
small nuclear ribonucleoprotein Sm D2, putative [Plasmodium falciparum 3D7]
101 aa protein
accession:XP_001349689.1
Sm snRNP core protein Smd2 [Schizosaccharomyces pombe]
115 aa protein
accession:NP_594506.1
PREDICTED: probable small nuclear ribonucleoprotein Sm D2 [Branchiostoma belcheri]
116 aa protein
accession:XP_019617365.1
small nuclear ribonucleoprotein Sm D2 [Danio rerio]
118 aa protein
accession:NP_001017582.1
small nuclear ribonucleoprotein Sm D2 isoform X1 [Rattus norvegicus]
118 aa protein
accession:XP_063129695.1
small nuclear ribonucleoprotein Sm D2-like [Mus musculus]
118 aa protein
accession:XP_036019390.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 171 | 171 | 98% | 6e-56 | 85.96% | XP_036019390.1 | |
| 2 | 170 | 170 | 98% | 2e-55 | 90.35% | NP_001017582.1 | |
| 3 | 168 | 168 | 98% | 1e-54 | 89.47% | XP_063129695.1 | |
| 4 | 163 | 163 | 96% | 1e-52 | 71.43% | NP_594506.1 | |
| 5 | 113 | 113 | 91% | 3e-33 | 62.26% | XP_001349689.1 |