Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_022139032.1 protein RDM16 isoform X3 [Momordica charantia] ... Query length: 640 aa

U4/U5/U6 small nuclear ribonucleoprotein complex subunit Prp3 ...

U4/U5/U6 small nuclear ribonucleoprotein complex subunit Prp3 [Schizosaccharomyces pombe]

542 aa protein

accession:NP_594560.1

Alignment Sequence Identical proteins

U4/U6 small nuclear ribonucleoprotein Prp3 ...

U4/U6 small nuclear ribonucleoprotein Prp3 [Danio rerio]

699 aa protein

accession:NP_991311.2

Alignment Sequence Identical proteins

U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 ...

U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 [Homo sapiens]

683 aa protein

accession:XP_047289951.1

Alignment Sequence Identical proteins

U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 ...

U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 [Rattus norvegicus]

683 aa protein

accession:XP_063138242.1

Alignment Sequence Identical proteins

Query: protein RDM16 isoform X3 ...

protein RDM16 isoform X3 [Momordica charantia]

640 aa protein

accession:XP_022139032.1

Sequence Identical proteins

protein RDM16 isoform X1 ...

protein RDM16 isoform X1 [Glycine max]

881 aa protein

accession:XP_040862465.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_040862465.1\|	protein RDM16 isoform X1 [Glycine max]	832	832	94%	0.0	71.94%	XP_040862465.1
2 Select seq ref\|NP_991311.2\|	U4/U6 small nuclear ribonucleoprotein Prp3 [Danio rerio]	269	269	82%	8e-80	35.03%	NP_991311.2
3 Select seq ref\|XP_047289951.1\|	U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 [Homo sapiens]	265	265	75%	2e-78	36.87%	XP_047289951.1
4 Select seq ref\|XP_063138242.1\|	U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 [Rattus norvegicus]	264	264	75%	4e-78	37.07%	XP_063138242.1
5 Select seq ref\|NP_594560.1\|	U4/U5/U6 small nuclear ribonucleoprotein complex subunit Prp3 [Schizosaccharomyces pombe]	177	177	66%	3e-47	32.52%	NP_594560.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments