Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_024895813.1 collagen alpha-1(XX) chain isoform X4 [Pteropus alecto] ... Query length: 1170 aa

collagen alpha-1(XXII) chain isoform X2 ...

collagen alpha-1(XXII) chain isoform X2 [Rattus norvegicus]

1583 aa protein

accession:XP_063120513.1

Alignment Sequence Identical proteins

collagen alpha-1(XIV) chain isoform X2 ...

collagen alpha-1(XIV) chain isoform X2 [Mus musculus]

1778 aa protein

accession:XP_036015006.1

Alignment Sequence Identical proteins

collagen alpha-1(XIV) chain isoform 6 precursor ...

collagen alpha-1(XIV) chain isoform 6 precursor [Homo sapiens]

1046 aa protein

accession:NP_001400426.1

Alignment Sequence Identical proteins

Query: collagen alpha-1(XX) chain isoform X4 ...

collagen alpha-1(XX) chain isoform X4 [Pteropus alecto]

1170 aa protein

accession:XP_024895813.1

Sequence Identical proteins

collagen alpha-1(XX) chain isoform X3 ...

collagen alpha-1(XX) chain isoform X3 [Danio rerio]

1567 aa protein

accession:XP_068075146.1

Alignment Sequence Identical proteins

collagen alpha-1(XX) chain isoform X2 ...

collagen alpha-1(XX) chain isoform X2 [Danio rerio]

1586 aa protein

accession:XP_021329304.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_068075146.1\|	collagen alpha-1(XX) chain isoform X3 [Danio rerio]	502	1018	95%	6e-154	37.37%	XP_068075146.1
2 Select seq ref\|XP_036015006.1\|	collagen alpha-1(XIV) chain isoform X2 [Mus musculus]	431	959	93%	3e-127	37.17%	XP_036015006.1
3 Select seq ref\|NP_001400426.1\|	collagen alpha-1(XIV) chain isoform 6 precursor [Homo sapiens]	417	508	55%	8e-127	36.34%	NP_001400426.1
4 Select seq ref\|XP_063120513.1\|	collagen alpha-1(XXII) chain isoform X2 [Rattus norvegicus]	135	408	50%	8e-31	39.13%	XP_063120513.1
5 Select seq ref\|XP_021329304.1\|	collagen alpha-1(XX) chain isoform X2 [Danio rerio]	503	1019	95%	7e-154	37.37%	XP_021329304.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments