Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_024980689.1
FIP1[V]-like protein isoform X2 [Cynara cardunculus var. scolymus]
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Query length:
1340 aa
DOMAINS: and other(s) domains
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cleavage and polyadenylation specificity factor FIP1
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cleavage and polyadenylation specificity factor FIP1 [Dictyostelium discoideum AX4]
560 aa protein
accession:XP_636526.1
pre-mRNA 3'-end-processing factor FIP1 isoform X4
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pre-mRNA 3'-end-processing factor FIP1 isoform X4 [Danio rerio]
413 aa protein
accession:XP_068075046.1
pre-mRNA 3'-end-processing factor FIP1 isoform X12
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pre-mRNA 3'-end-processing factor FIP1 isoform X12 [Rattus norvegicus]
487 aa protein
accession:XP_063128977.1
FIP1ke protein [Arabidopsis thaliana]
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FIP1[V]-like protein [Arabidopsis thaliana]
1193 aa protein
accession:NP_001332116.1
Query: FIP1ke protein isoform X2 [Cynara cardunculus var. scolymus]
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FIP1[V]-like protein isoform X2 [Cynara cardunculus var. scolymus]
1340 aa protein
accession:XP_024980689.1
FIP1ke protein isoform X2 [Glycine max]
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FIP1[V]-like protein isoform X2 [Glycine max]
1118 aa protein
accession:XP_040866021.1
DOMAINS: and other(s) domains
...
cleavage and polyadenylation specificity factor FIP1 [Dictyostelium discoideum AX4]
560 aa protein
accession:XP_636526.1
pre-mRNA 3'-end-processing factor FIP1 isoform X4 [Danio rerio]
413 aa protein
accession:XP_068075046.1
pre-mRNA 3'-end-processing factor FIP1 isoform X12 [Rattus norvegicus]
487 aa protein
accession:XP_063128977.1
FIP1[V]-like protein [Arabidopsis thaliana]
1193 aa protein
accession:NP_001332116.1
FIP1[V]-like protein isoform X2 [Cynara cardunculus var. scolymus]
1340 aa protein
accession:XP_024980689.1
FIP1[V]-like protein isoform X2 [Glycine max]
1118 aa protein
accession:XP_040866021.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 605 | 605 | 86% | 0.0 | 41.29% | XP_040866021.1 | |
| 2 | 388 | 694 | 79% | 1e-113 | 52.34% | NP_001332116.1 | |
| 3 | 79.7 | 79.7 | 4% | 5e-14 | 50.77% | XP_636526.1 | |
| 4 | 71.2 | 71.2 | 5% | 1e-11 | 41.56% | XP_068075046.1 | |
| 5 | 71.2 | 71.2 | 5% | 2e-11 | 39.02% | XP_063128977.1 |