Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_025274201.3
HLA class II histocompatibility antigen, DM beta chain [Canis lupus dingo]
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Query length:
263 aa
DOMAINS: and other(s) domains
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HLA class II histocompatibility antigen, DP beta 1 chain precursor
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HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor
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H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor [Mus musculus]
389 aa protein
accession:NP_001390291.1
RT1 class I, locus CE12 isoform X5
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RT1 class I, locus CE12 isoform X5 [Rattus norvegicus]
296 aa protein
accession:XP_063135168.1
Query: HLA class II histocompatibility antigen, DM beta chain
...
HLA class II histocompatibility antigen, DM beta chain [Canis lupus dingo]
263 aa protein
accession:XP_025274201.3
HLA class II histocompatibility antigen, DM beta chain precursor
...
HLA class II histocompatibility antigen, DM beta chain precursor [Homo sapiens]
263 aa protein
accession:NP_002109.2
RT1 class II, DM beta isoform X1
...
RT1 class II, DM beta isoform X1 [Rattus norvegicus]
279 aa protein
accession:XP_063135087.1
DOMAINS: and other(s) domains
...
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor [Mus musculus]
389 aa protein
accession:NP_001390291.1
RT1 class I, locus CE12 isoform X5 [Rattus norvegicus]
296 aa protein
accession:XP_063135168.1
HLA class II histocompatibility antigen, DM beta chain [Canis lupus dingo]
263 aa protein
accession:XP_025274201.3
HLA class II histocompatibility antigen, DM beta chain precursor [Homo sapiens]
263 aa protein
accession:NP_002109.2
RT1 class II, DM beta isoform X1 [Rattus norvegicus]
279 aa protein
accession:XP_063135087.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 409 | 409 | 94% | 3e-145 | 77.42% | NP_002109.2 | |
| 2 | 371 | 371 | 93% | 6e-130 | 69.23% | XP_063135087.1 | |
| 3 | 81.6 | 81.6 | 95% | 7e-17 | 29.96% | NP_001390291.1 | |
| 4 | 82.0 | 82.0 | 75% | 2e-17 | 28.50% | NP_002112.3 | |
| 5 | 80.5 | 80.5 | 94% | 1e-16 | 26.82% | XP_063135168.1 |