Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_025455451.1
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
...
Query length:
664 aa
DOMAINS: and other(s) domains
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PAN complex subunit Ppk26
...
PAN complex subunit Ppk26 [Schizosaccharomyces pombe]
589 aa protein
accession:NP_596134.1
Query: PAB-dependent poly(A)-specific ribonuclease subunit pan3
...
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
664 aa protein
accession:XP_025455451.1
PAN2-PAN3 deadenylation complex subunit PAN3 isoform X11
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PAN2-PAN3 deadenylation complex subunit PAN3 isoform X11 [Homo sapiens]
553 aa protein
accession:XP_047286209.1
PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11
...
PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11 [Mus musculus]
557 aa protein
accession:XP_006504941.1
PAN2-PAN3 deadenylation complex subunit PAN3
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PAN2-PAN3 deadenylation complex subunit PAN3 [Danio rerio]
799 aa protein
accession:NP_001099162.2
Poly(A) specific ribonuclease subunit PAN3, isoform O
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Poly(A) specific ribonuclease subunit PAN3, isoform O [Drosophila melanogaster]
749 aa protein
accession:NP_001097486.1
DOMAINS: and other(s) domains
...
PAN complex subunit Ppk26 [Schizosaccharomyces pombe]
589 aa protein
accession:NP_596134.1
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
664 aa protein
accession:XP_025455451.1
PAN2-PAN3 deadenylation complex subunit PAN3 isoform X11 [Homo sapiens]
553 aa protein
accession:XP_047286209.1
PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11 [Mus musculus]
557 aa protein
accession:XP_006504941.1
PAN2-PAN3 deadenylation complex subunit PAN3 [Danio rerio]
799 aa protein
accession:NP_001099162.2
Poly(A) specific ribonuclease subunit PAN3, isoform O [Drosophila melanogaster]
749 aa protein
accession:NP_001097486.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 337 | 337 | 71% | 9e-107 | 36.26% | XP_047286209.1 | |
| 2 | 335 | 335 | 69% | 1e-105 | 36.20% | XP_006504941.1 | |
| 3 | 333 | 333 | 69% | 1e-102 | 36.48% | NP_001099162.2 | |
| 4 | 298 | 298 | 71% | 1e-89 | 33.85% | NP_001097486.1 | |
| 5 | 268 | 268 | 95% | 5e-80 | 28.39% | NP_596134.1 |