Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_026236002.1 collagen alpha-1(XVIII) chain isoform X1 [Urocitellus parryii] ... Query length: 1516 aa

collagen alpha-1(XXIV) chain isoform X1 ...

collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]

1731 aa protein

accession:XP_063138993.1

Alignment Sequence Identical proteins

multiplexin, isoform T ...

multiplexin, isoform T [Drosophila melanogaster]

1022 aa protein

accession:NP_001286961.1

Alignment Sequence Identical proteins

collagen alpha-1(XVIII) chain isoform X1 ...

collagen alpha-1(XVIII) chain isoform X1 [Danio rerio]

1259 aa protein

accession:XP_021332753.1

Alignment Sequence Identical proteins

collagen alpha-1(XVIII) chain isoform 3 precursor ...

collagen alpha-1(XVIII) chain isoform 3 precursor [Mus musculus]

1314 aa protein

accession:NP_001393179.1

Alignment Sequence Identical proteins

Query: collagen alpha-1(XVIII) chain isoform X1 ...

collagen alpha-1(XVIII) chain isoform X1 [Urocitellus parryii]

1516 aa protein

accession:XP_026236002.1

Sequence Identical proteins

collagen alpha-1(XVIII) chain isoform 1 preproprotein ...

collagen alpha-1(XVIII) chain isoform 1 preproprotein [Homo sapiens]

1516 aa protein

accession:NP_085059.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_085059.2\|	collagen alpha-1(XVIII) chain isoform 1 preproprotein [Homo sapiens]	1603	1603	98%	0.0	75.39%	NP_085059.2
2 Select seq ref\|NP_001393179.1\|	collagen alpha-1(XVIII) chain isoform 3 precursor [Mus musculus]	1480	1480	85%	0.0	79.92%	NP_001393179.1
3 Select seq ref\|XP_021332753.1\|	collagen alpha-1(XVIII) chain isoform X1 [Danio rerio]	355	545	75%	6e-101	45.90%	XP_021332753.1
4 Select seq ref\|NP_001286961.1\|	multiplexin, isoform T [Drosophila melanogaster]	221	398	80%	1e-57	31.91%	NP_001286961.1
5 Select seq ref\|XP_063138993.1\|	collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]	203	916	44%	1e-51	36.85%	XP_063138993.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments