Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_027369246.1 CCR4-NOT transcription complex subunit 9 isoform X2 [Bos indicus x Bos taurus] ... Query length: 245 aa

CCR4-NOT complex subunit Rcd1 ...

CCR4-NOT complex subunit Rcd1 [Schizosaccharomyces pombe]

283 aa protein

accession:NP_594984.1

Alignment Sequence Identical proteins

required for cell differentiation 1, isoform B ...

required for cell differentiation 1, isoform B [Drosophila melanogaster]

304 aa protein

accession:NP_608335.1

Alignment Sequence Identical proteins

Query: CCR4-NOT transcription complex subunit 9 isoform X2 ...

CCR4-NOT transcription complex subunit 9 isoform X2 [Bos indicus x Bos taurus]

245 aa protein

accession:XP_027369246.1

Sequence Identical proteins

CCR4-NOT transcription complex subunit 9 isoform 2 ...

CCR4-NOT transcription complex subunit 9 isoform 2 [Homo sapiens]

299 aa protein

accession:NP_005435.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 9 ...

CCR4-NOT transcription complex subunit 9 [Mus musculus]

299 aa protein

accession:NP_067358.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 9 ...

CCR4-NOT transcription complex subunit 9 [Danio rerio]

298 aa protein

accession:NP_999925.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_005435.1\|	CCR4-NOT transcription complex subunit 9 isoform 2 [Homo sapiens]	505	505	100%	0.0	100.00%	NP_005435.1
2 Select seq ref\|NP_067358.1\|	CCR4-NOT transcription complex subunit 9 [Mus musculus]	505	505	100%	0.0	100.00%	NP_067358.1
3 Select seq ref\|NP_999925.1\|	CCR4-NOT transcription complex subunit 9 [Danio rerio]	493	493	100%	7e-178	97.96%	NP_999925.1
4 Select seq ref\|NP_608335.1\|	required for cell differentiation 1, isoform B [Drosophila melanogaster]	400	400	99%	6e-141	79.51%	NP_608335.1
5 Select seq ref\|NP_594984.1\|	CCR4-NOT complex subunit Rcd1 [Schizosaccharomyces pombe]	357	357	96%	2e-124	72.88%	NP_594984.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments