Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_027781510.2 rhox homeobox family member 1-like [Marmota flaviventris] ... Query length: 152 aa

ALX homeobox protein 1 isoform 2 ...

ALX homeobox protein 1 isoform 2 [Mus musculus]

377 aa protein

accession:NP_001408403.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG32532, isoform D ...

uncharacterized protein Dmel_CG32532, isoform D [Drosophila melanogaster]

688 aa protein

accession:NP_608318.5

Alignment Sequence Identical proteins

pituitary homeobox 2 isoform X1 ...

pituitary homeobox 2 isoform X1 [Rattus norvegicus]

317 aa protein

accession:XP_063138490.1

Alignment Sequence Identical proteins

Query: rhox homeobox family member 1-like ...

rhox homeobox family member 1-like [Marmota flaviventris]

152 aa protein

accession:XP_027781510.2

Sequence Identical proteins

paired mesoderm homeobox protein 2A ...

paired mesoderm homeobox protein 2A [Danio rerio]

280 aa protein

accession:NP_996953.2

Alignment Sequence Identical proteins

paired mesoderm homeobox protein 2A isoform 4 ...

paired mesoderm homeobox protein 2A isoform 4 [Homo sapiens]

182 aa protein

accession:NP_001412027.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_996953.2\|	paired mesoderm homeobox protein 2A [Danio rerio]	63.5	63.5	46%	9e-12	43.42%	NP_996953.2
2 Select seq ref\|NP_001412027.1\|	paired mesoderm homeobox protein 2A isoform 4 [Homo sapiens]	60.8	60.8	46%	3e-11	40.79%	NP_001412027.1
3 Select seq ref\|XP_063138490.1\|	pituitary homeobox 2 isoform X1 [Rattus norvegicus]	57.0	57.0	42%	2e-09	43.75%	XP_063138490.1
4 Select seq ref\|NP_608318.5\|	uncharacterized protein Dmel_CG32532, isoform D [Drosophila melanogaster]	55.8	55.8	42%	8e-09	43.75%	NP_608318.5
5 Select seq ref\|NP_001408403.1\|	ALX homeobox protein 1 isoform 2 [Mus musculus]	47.8	47.8	38%	5e-06	42.37%	NP_001408403.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments