Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_027800234.1
nuclear receptor subfamily 6 group A member 1 isoform X1 [Marmota flaviventris]
...
Query length:
495 aa
DOMAINS: and other(s) domains
...
ftz transcription factor 1, isoform D
...
ftz transcription factor 1, isoform D [Drosophila melanogaster]
853 aa protein
accession:NP_001303366.1
nuclear receptor subfamily 2 group E member 1
...
nuclear receptor subfamily 2 group E member 1 [Rattus norvegicus]
385 aa protein
accession:NP_001106668.2
nuclear receptor subfamily 2 group E member 1 isoform X1
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nuclear receptor subfamily 2 group E member 1 isoform X1 [Mus musculus]
381 aa protein
accession:XP_036011658.1
retinoic acid receptor RXR-beta-B
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retinoic acid receptor RXR-beta-B [Danio rerio]
422 aa protein
accession:NP_571313.1
Query: nuclear receptor subfamily 6 group A member 1 isoform X1
...
nuclear receptor subfamily 6 group A member 1 isoform X1 [Marmota flaviventris]
495 aa protein
accession:XP_027800234.1
nuclear receptor subfamily 6 group A member 1 isoform 5
...
nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]
479 aa protein
accession:NP_001397925.1
DOMAINS: and other(s) domains
...
ftz transcription factor 1, isoform D [Drosophila melanogaster]
853 aa protein
accession:NP_001303366.1
nuclear receptor subfamily 2 group E member 1 [Rattus norvegicus]
385 aa protein
accession:NP_001106668.2
nuclear receptor subfamily 2 group E member 1 isoform X1 [Mus musculus]
381 aa protein
accession:XP_036011658.1
retinoic acid receptor RXR-beta-B [Danio rerio]
422 aa protein
accession:NP_571313.1
nuclear receptor subfamily 6 group A member 1 isoform X1 [Marmota flaviventris]
495 aa protein
accession:XP_027800234.1
nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]
479 aa protein
accession:NP_001397925.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 967 | 967 | 100% | 0.0 | 94.95% | NP_001397925.1 | |
| 2 | 126 | 126 | 81% | 4e-31 | 25.94% | NP_001106668.2 | |
| 3 | 125 | 125 | 81% | 8e-31 | 24.88% | XP_036011658.1 | |
| 4 | 115 | 189 | 57% | 3e-26 | 46.60% | NP_001303366.1 | |
| 5 | 111 | 197 | 52% | 1e-25 | 55.70% | NP_571313.1 |