Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_028858500.1
proteasome subunit alpha type-6 [Denticeps clupeoides]
...
Query length:
246 aa
DOMAINS: and other(s) domains
...
archaeal proteasome endopeptidase complex subunit alpha
...
archaeal proteasome endopeptidase complex subunit alpha [Methanothermobacter]
248 aa protein
accession:WP_010876325.1
proteasome subunit alpha type-6, putative
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proteasome subunit alpha type-6, putative [Plasmodium falciparum 3D7]
260 aa protein
accession:XP_001349448.2
proteasome subunit alpha type 6
...
proteasome subunit alpha type 6 [Dictyostelium discoideum AX4]
250 aa protein
accession:XP_642003.1
proteasome core particle subunit alpha 1
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proteasome core particle subunit alpha 1 [Saccharomyces cerevisiae S288C]
252 aa protein
accession:NP_011504.3
Query: proteasome subunit alpha type-6
...
proteasome subunit alpha type-6 [Denticeps clupeoides]
246 aa protein
accession:XP_028858500.1
proteasome subunit alpha type-6a isoform 1
...
proteasome subunit alpha type-6a isoform 1 [Danio rerio]
246 aa protein
accession:NP_705941.2
DOMAINS: and other(s) domains
...
archaeal proteasome endopeptidase complex subunit alpha [Methanothermobacter]
248 aa protein
accession:WP_010876325.1
proteasome subunit alpha type-6, putative [Plasmodium falciparum 3D7]
260 aa protein
accession:XP_001349448.2
proteasome subunit alpha type 6 [Dictyostelium discoideum AX4]
250 aa protein
accession:XP_642003.1
proteasome core particle subunit alpha 1 [Saccharomyces cerevisiae S288C]
252 aa protein
accession:NP_011504.3
proteasome subunit alpha type-6 [Denticeps clupeoides]
246 aa protein
accession:XP_028858500.1
proteasome subunit alpha type-6a isoform 1 [Danio rerio]
246 aa protein
accession:NP_705941.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 495 | 495 | 100% | 1e-179 | 93.90% | NP_705941.2 | |
| 2 | 288 | 288 | 100% | 8e-98 | 53.78% | XP_642003.1 | |
| 3 | 262 | 262 | 96% | 1e-87 | 55.56% | NP_011504.3 | |
| 4 | 231 | 231 | 100% | 4e-75 | 43.08% | XP_001349448.2 | |
| 5 | 160 | 160 | 96% | 2e-47 | 35.86% | WP_010876325.1 |