Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_029945712.1
LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like [Salarias fasciatus]
...
Query length:
784 aa
DOMAINS: and other(s) domains
...
MHC class II regulatory factor RFX1 isoform X5
...
MHC class II regulatory factor RFX1 isoform X5 [Homo sapiens]
881 aa protein
accession:XP_047295151.1
MHC class II regulatory factor RFX1
...
MHC class II regulatory factor RFX1 [Mus musculus]
963 aa protein
accession:NP_033081.3
Query: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like
...
LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like [Salarias fasciatus]
784 aa protein
accession:XP_029945712.1
MHC class II regulatory factor RFX1 isoform X3
...
MHC class II regulatory factor RFX1 isoform X3 [Danio rerio]
891 aa protein
accession:XP_005163908.1
MHC class II regulatory factor RFX1 isoform X2
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MHC class II regulatory factor RFX1 isoform X2 [Danio rerio]
908 aa protein
accession:XP_021324675.1
MHC class II regulatory factor RFX1 isoform X1
...
MHC class II regulatory factor RFX1 isoform X1 [Danio rerio]
914 aa protein
accession:XP_021324672.1
DOMAINS: and other(s) domains
...
MHC class II regulatory factor RFX1 isoform X5 [Homo sapiens]
881 aa protein
accession:XP_047295151.1
MHC class II regulatory factor RFX1 [Mus musculus]
963 aa protein
accession:NP_033081.3
LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like [Salarias fasciatus]
784 aa protein
accession:XP_029945712.1
MHC class II regulatory factor RFX1 isoform X3 [Danio rerio]
891 aa protein
accession:XP_005163908.1
MHC class II regulatory factor RFX1 isoform X2 [Danio rerio]
908 aa protein
accession:XP_021324675.1
MHC class II regulatory factor RFX1 isoform X1 [Danio rerio]
914 aa protein
accession:XP_021324672.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1019 | 1172 | 97% | 0.0 | 91.16% | XP_005163908.1 | |
| 2 | 971 | 971 | 83% | 0.0 | 75.71% | XP_047295151.1 | |
| 3 | 912 | 1021 | 80% | 0.0 | 82.96% | NP_033081.3 | |
| 4 | 1019 | 1172 | 96% | 0.0 | 92.29% | XP_021324675.1 | |
| 5 | 1017 | 1169 | 96% | 0.0 | 91.64% | XP_021324672.1 |