Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_030104524.1
pre-mRNA-processing factor 40 homolog B isoform X5 [Mus musculus]
...
Query length:
891 aa
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog B isoform 1
...
pre-mRNA-processing factor 40 homolog B isoform 1 [Homo sapiens]
892 aa protein
accession:NP_001026868.2
pre-mRNA-processing factor 40 homolog B isoform X9
...
pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform 5
...
pre-mRNA-processing factor 40 homolog B isoform 5 [Mus musculus]
892 aa protein
accession:NP_001357563.1
pre-mRNA-processing factor 40 homolog B isoform 4
...
pre-mRNA-processing factor 40 homolog B isoform 4 [Mus musculus]
895 aa protein
accession:NP_001357562.1
Query: pre-mRNA-processing factor 40 homolog B isoform X5
...
pre-mRNA-processing factor 40 homolog B isoform X5 [Mus musculus]
891 aa protein
accession:XP_030104524.1
pre-mRNA-processing factor 40 homolog B isoform X4
...
pre-mRNA-processing factor 40 homolog B isoform X4 [Mus musculus]
898 aa protein
accession:XP_006521243.1
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog B isoform 1 [Homo sapiens]
892 aa protein
accession:NP_001026868.2
pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform 5 [Mus musculus]
892 aa protein
accession:NP_001357563.1
pre-mRNA-processing factor 40 homolog B isoform 4 [Mus musculus]
895 aa protein
accession:NP_001357562.1
pre-mRNA-processing factor 40 homolog B isoform X5 [Mus musculus]
891 aa protein
accession:XP_030104524.1
pre-mRNA-processing factor 40 homolog B isoform X4 [Mus musculus]
898 aa protein
accession:XP_006521243.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1805 | 1805 | 100% | 0.0 | 99.89% | NP_001357563.1 | |
| 2 | 1790 | 1790 | 100% | 0.0 | 98.99% | XP_063120028.1 | |
| 3 | 1719 | 1719 | 100% | 0.0 | 95.53% | NP_001026868.2 | |
| 4 | 1805 | 1805 | 99% | 0.0 | 100.00% | XP_006521243.1 | |
| 5 | 1805 | 1805 | 100% | 0.0 | 99.55% | NP_001357562.1 |