Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_032553148.1
LIM homeobox transcription factor 1-alpha isoform X2 [Chiroxiphia lanceolata]
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Query length:
279 aa
DOMAINS: and other(s) domains
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LIM/homeobox protein lim-6
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LIM/homeobox protein lim-6 [Caenorhabditis elegans]
316 aa protein
accession:NP_001256980.1
uncharacterized protein Dmel_CG4328
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uncharacterized protein Dmel_CG4328 [Drosophila melanogaster]
544 aa protein
accession:NP_648567.2
LIM homeobox transcription factor 1, beta a isoform 2
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LIM homeobox transcription factor 1, beta a isoform 2 [Danio rerio]
373 aa protein
accession:NP_001020339.1
Query: LIM homeobox transcription factor 1-alpha isoform X2
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LIM homeobox transcription factor 1-alpha isoform X2 [Chiroxiphia lanceolata]
279 aa protein
accession:XP_032553148.1
LIM homeobox transcription factor 1-alpha isoform X1
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LIM homeobox transcription factor 1-alpha isoform X1 [Homo sapiens]
302 aa protein
accession:XP_011507840.1
LIM homeobox transcription factor 1-alpha
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LIM homeobox transcription factor 1-alpha [Mus musculus]
382 aa protein
accession:NP_001404412.1
DOMAINS: and other(s) domains
...
LIM/homeobox protein lim-6 [Caenorhabditis elegans]
316 aa protein
accession:NP_001256980.1
uncharacterized protein Dmel_CG4328 [Drosophila melanogaster]
544 aa protein
accession:NP_648567.2
LIM homeobox transcription factor 1, beta a isoform 2 [Danio rerio]
373 aa protein
accession:NP_001020339.1
LIM homeobox transcription factor 1-alpha isoform X2 [Chiroxiphia lanceolata]
279 aa protein
accession:XP_032553148.1
LIM homeobox transcription factor 1-alpha isoform X1 [Homo sapiens]
302 aa protein
accession:XP_011507840.1
LIM homeobox transcription factor 1-alpha [Mus musculus]
382 aa protein
accession:NP_001404412.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 482 | 482 | 100% | 6e-173 | 88.93% | XP_011507840.1 | |
| 2 | 481 | 481 | 100% | 3e-171 | 88.57% | NP_001404412.1 | |
| 3 | 344 | 344 | 100% | 3e-117 | 67.96% | NP_001020339.1 | |
| 4 | 153 | 153 | 99% | 2e-41 | 38.87% | NP_648567.2 | |
| 5 | 128 | 128 | 52% | 9e-34 | 46.31% | NP_001256980.1 |