Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_034115395.1
U6 snRNA-associated Sm-like protein LSm3 [Drosophila albomicans]
...
Query length:
103 aa
DOMAINS: and other(s) domains
...
U4/U6-U5 snRNP complex subunit LSM3
...
U4/U6-U5 snRNP complex subunit LSM3 [Saccharomyces cerevisiae S288C]
89 aa protein
accession:NP_013543.3
U6 snRNA-associated Sm-like protein LSm3, putative
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U6 snRNA-associated Sm-like protein LSm3, putative [Plasmodium falciparum 3D7]
91 aa protein
accession:XP_002808862.1
LSM domain-containing protein
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LSM domain-containing protein [Dictyostelium discoideum AX4]
97 aa protein
accession:XP_001134590.1
uncharacterized protein LOC100306547 isoform X1
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uncharacterized protein LOC100306547 isoform X1 [Glycine max]
97 aa protein
accession:XP_040861604.1
Query: U6 snRNA-associated Sm-like protein LSm3
...
U6 snRNA-associated Sm-like protein LSm3 [Drosophila albomicans]
103 aa protein
accession:XP_034115395.1
U6 snRNA-associated Sm-like protein LSm3
...
U6 snRNA-associated Sm-like protein LSm3 [Danio rerio]
102 aa protein
accession:NP_001373759.1
DOMAINS: and other(s) domains
...
U4/U6-U5 snRNP complex subunit LSM3 [Saccharomyces cerevisiae S288C]
89 aa protein
accession:NP_013543.3
U6 snRNA-associated Sm-like protein LSm3, putative [Plasmodium falciparum 3D7]
91 aa protein
accession:XP_002808862.1
LSM domain-containing protein [Dictyostelium discoideum AX4]
97 aa protein
accession:XP_001134590.1
uncharacterized protein LOC100306547 isoform X1 [Glycine max]
97 aa protein
accession:XP_040861604.1
U6 snRNA-associated Sm-like protein LSm3 [Drosophila albomicans]
103 aa protein
accession:XP_034115395.1
U6 snRNA-associated Sm-like protein LSm3 [Danio rerio]
102 aa protein
accession:NP_001373759.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 169 | 169 | 100% | 2e-55 | 78.64% | NP_001373759.1 | |
| 2 | 156 | 156 | 100% | 2e-50 | 71.84% | XP_040861604.1 | |
| 3 | 135 | 135 | 86% | 5e-42 | 69.66% | XP_001134590.1 | |
| 4 | 82.0 | 82.0 | 87% | 5e-21 | 44.57% | XP_002808862.1 | |
| 5 | 77.8 | 77.8 | 79% | 2e-19 | 48.78% | NP_013543.3 |