Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_034596992.1 trafficking protein particle complex subunit 1 [Setaria viridis] ... Query length: 178 aa

trafficking protein particle complex subunit 1 ...

trafficking protein particle complex subunit 1 [Mus musculus]

145 aa protein

accession:NP_001019377.1

Alignment Sequence Identical proteins

trafficking protein particle complex subunit 1 ...

trafficking protein particle complex subunit 1 [Homo sapiens]

145 aa protein

accession:NP_001160093.1

Alignment Sequence Identical proteins

trafficking protein particle complex subunit 1 isoform 2 ...

trafficking protein particle complex subunit 1 isoform 2 [Danio rerio]

145 aa protein

accession:NP_001002742.2

Alignment Sequence Identical proteins

Query: trafficking protein particle complex subunit 1 ...

trafficking protein particle complex subunit 1 [Setaria viridis]

178 aa protein

accession:XP_034596992.1

Sequence Identical proteins

sybindin-like family protein ...

sybindin-like family protein [Glycine max]

170 aa protein

accession:NP_001240237.1

Alignment Sequence Identical proteins

SNARE-like superfamily protein ...

SNARE-like superfamily protein [Arabidopsis thaliana]

169 aa protein

accession:NP_001031168.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001240237.1\|	sybindin-like family protein [Glycine max]	268	268	99%	4e-92	73.03%	NP_001240237.1
2 Select seq ref\|NP_001031168.1\|	SNARE-like superfamily protein [Arabidopsis thaliana]	265	265	99%	9e-91	70.06%	NP_001031168.1
3 Select seq ref\|NP_001019377.1\|	trafficking protein particle complex subunit 1 [Mus musculus]	126	126	80%	2e-36	46.21%	NP_001019377.1
4 Select seq ref\|NP_001160093.1\|	trafficking protein particle complex subunit 1 [Homo sapiens]	124	124	80%	3e-35	45.52%	NP_001160093.1
5 Select seq ref\|NP_001002742.2\|	trafficking protein particle complex subunit 1 isoform 2 [Danio rerio]	114	114	80%	2e-31	40.00%	NP_001002742.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments