Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_038314081.1 collagen alpha-1(XX) chain [Canis lupus familiaris] ... Query length: 1342 aa

collagen alpha-1(XXII) chain isoform X2 ...

collagen alpha-1(XXII) chain isoform X2 [Rattus norvegicus]

1583 aa protein

accession:XP_063120513.1

Alignment Sequence Identical proteins

collagen alpha-1(XIV) chain isoform X2 ...

collagen alpha-1(XIV) chain isoform X2 [Mus musculus]

1778 aa protein

accession:XP_036015006.1

Alignment Sequence Identical proteins

collagen alpha-1(XIV) chain isoform 5 precursor ...

collagen alpha-1(XIV) chain isoform 5 precursor [Homo sapiens]

1075 aa protein

accession:NP_001400425.1

Alignment Sequence Identical proteins

Query: collagen alpha-1(XX) chain ...

collagen alpha-1(XX) chain [Canis lupus familiaris]

1342 aa protein

accession:XP_038314081.1

Sequence Identical proteins

collagen alpha-1(XX) chain isoform X2 ...

collagen alpha-1(XX) chain isoform X2 [Danio rerio]

1586 aa protein

accession:XP_021329304.1

Alignment Sequence Identical proteins

collagen alpha-1(XX) chain isoform X1 ...

collagen alpha-1(XX) chain isoform X1 [Danio rerio]

1587 aa protein

accession:XP_021329303.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_021329304.1\|	collagen alpha-1(XX) chain isoform X2 [Danio rerio]	528	1184	92%	2e-161	37.76%	XP_021329304.1
2 Select seq ref\|XP_036015006.1\|	collagen alpha-1(XIV) chain isoform X2 [Mus musculus]	473	1025	91%	2e-140	35.19%	XP_036015006.1
3 Select seq ref\|NP_001400425.1\|	collagen alpha-1(XIV) chain isoform 5 precursor [Homo sapiens]	456	605	59%	2e-139	35.07%	NP_001400425.1
4 Select seq ref\|XP_063120513.1\|	collagen alpha-1(XXII) chain isoform X2 [Rattus norvegicus]	138	704	43%	1e-31	39.13%	XP_063120513.1
5 Select seq ref\|XP_021329303.1\|	collagen alpha-1(XX) chain isoform X1 [Danio rerio]	528	1184	92%	2e-161	37.76%	XP_021329303.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments