Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_038940465.1 opalin isoform X1 [Rattus norvegicus] ... Query length: 105 aa

opalin isoform d ...

opalin isoform d [Homo sapiens]

130 aa protein

accession:NP_001271249.1

Alignment Sequence Identical proteins

opalin isoform a ...

opalin isoform a [Homo sapiens]

141 aa protein

accession:NP_149984.1

Alignment Sequence Identical proteins

opalin isoform c ...

opalin isoform c [Homo sapiens]

131 aa protein

accession:NP_001035192.1

Alignment Sequence Identical proteins

opalin ...

opalin [Mus musculus]

143 aa protein

accession:NP_705740.1

Alignment Sequence Identical proteins

Query: opalin isoform X1 ...

opalin isoform X1 [Rattus norvegicus]

105 aa protein

accession:XP_038940465.1

Sequence Identical proteins

opalin ...

opalin [Rattus norvegicus]

142 aa protein

accession:NP_001017386.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001017386.1\|	opalin [Rattus norvegicus]	167	167	84%	8e-54	95.51%	NP_001017386.1
2 Select seq ref\|NP_705740.1\|	opalin [Mus musculus]	132	132	80%	6e-40	90.70%	NP_705740.1
3 Select seq ref\|NP_149984.1\|	opalin isoform a [Homo sapiens]	128	128	80%	4e-38	76.47%	NP_149984.1
4 Select seq ref\|NP_001271249.1\|	opalin isoform d [Homo sapiens]	110	110	80%	4e-31	67.06%	NP_001271249.1
5 Select seq ref\|NP_001035192.1\|	opalin isoform c [Homo sapiens]	105	105	70%	3e-29	71.62%	NP_001035192.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments