Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_038945994.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform X1 [Rattus norvegicus]
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Query length:
229 aa
DOMAINS: and other(s) domains
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v-SNARE family protein
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v-SNARE family protein [Dictyostelium discoideum AX4]
217 aa protein
accession:XP_629410.1
vesicle transport v-SNARE 13-like isoform X2
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vesicle transport v-SNARE 13-like isoform X2 [Glycine max]
172 aa protein
accession:XP_040871938.1
vesicle transport through interaction with t-SNAREs homolog 1A
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vesicle transport through interaction with t-SNAREs homolog 1A [Danio rerio]
217 aa protein
accession:NP_001300679.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform 4
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vesicle transport through interaction with t-SNAREs homolog 1A isoform 4 [Mus musculus]
194 aa protein
accession:NP_001347360.1
Query: vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
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vesicle transport through interaction with t-SNAREs homolog 1A isoform X1 [Rattus norvegicus]
229 aa protein
accession:XP_038945994.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform X6
...
vesicle transport through interaction with t-SNAREs homolog 1A isoform X6 [Rattus norvegicus]
212 aa protein
accession:XP_063129124.1
DOMAINS: and other(s) domains
...
v-SNARE family protein [Dictyostelium discoideum AX4]
217 aa protein
accession:XP_629410.1
vesicle transport v-SNARE 13-like isoform X2 [Glycine max]
172 aa protein
accession:XP_040871938.1
vesicle transport through interaction with t-SNAREs homolog 1A [Danio rerio]
217 aa protein
accession:NP_001300679.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform 4 [Mus musculus]
194 aa protein
accession:NP_001347360.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform X1 [Rattus norvegicus]
229 aa protein
accession:XP_038945994.1
vesicle transport through interaction with t-SNAREs homolog 1A isoform X6 [Rattus norvegicus]
212 aa protein
accession:XP_063129124.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 380 | 380 | 86% | 4e-135 | 96.98% | XP_063129124.1 | |
| 2 | 372 | 372 | 86% | 2e-132 | 93.97% | NP_001347360.1 | |
| 3 | 332 | 332 | 100% | 3e-116 | 73.80% | NP_001300679.1 | |
| 4 | 76.3 | 76.3 | 87% | 5e-16 | 26.37% | XP_629410.1 | |
| 5 | 70.9 | 70.9 | 75% | 3e-14 | 27.75% | XP_040871938.1 |