Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_038953800.1
TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1 [Rattus norvegicus]
...
Query length:
653 aa
DOMAINS: and other(s) domains
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uncharacterized protein LOC100797045
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uncharacterized protein LOC100797045 [Glycine max]
894 aa protein
accession:XP_006588648.1
TATA box-binding protein-associated factor RNA polymerase I subunit C
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TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6
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TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6 [Homo sapiens]
776 aa protein
accession:XP_016879336.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2
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TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2 [Mus musculus]
646 aa protein
accession:NP_001365830.1
Query: TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1
...
TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1 [Rattus norvegicus]
653 aa protein
accession:XP_038953800.1
TATA box-binding protein-associated factor, RNA polymerase I, subunit C
...
TATA box-binding protein-associated factor, RNA polymerase I, subunit C [Rattus norvegicus]
842 aa protein
accession:NP_001014177.1
DOMAINS: and other(s) domains
...
uncharacterized protein LOC100797045 [Glycine max]
894 aa protein
accession:XP_006588648.1
TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6 [Homo sapiens]
776 aa protein
accession:XP_016879336.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2 [Mus musculus]
646 aa protein
accession:NP_001365830.1
TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1 [Rattus norvegicus]
653 aa protein
accession:XP_038953800.1
TATA box-binding protein-associated factor, RNA polymerase I, subunit C [Rattus norvegicus]
842 aa protein
accession:NP_001014177.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1307 | 1307 | 100% | 0.0 | 100.00% | NP_001014177.1 | |
2 | 1065 | 1065 | 100% | 0.0 | 85.93% | NP_001365830.1 | |
3 | 706 | 706 | 100% | 0.0 | 65.52% | XP_016879336.1 | |
4 | 264 | 305 | 76% | 3e-75 | 37.69% | XP_002665919.3 | |
5 | 42.0 | 42.0 | 15% | 0.028 | 31.78% | XP_006588648.1 |