Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_038960404.1
pre-mRNA-processing factor 40 homolog A isoform X6 [Rattus norvegicus]
...
Query length:
970 aa
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog A
...
pre-mRNA-processing factor 40 homolog A [Danio rerio]
851 aa protein
accession:NP_938170.1
pre-mRNA-processing factor 40 homolog A isoform X3
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pre-mRNA-processing factor 40 homolog A isoform X3 [Homo sapiens]
976 aa protein
accession:XP_047300898.1
pre-mRNA-processing factor 40 homolog A isoform X1
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pre-mRNA-processing factor 40 homolog A isoform X1 [Mus musculus]
1016 aa protein
accession:XP_006498256.2
pre-mRNA-processing factor 40 homolog A isoform X5
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pre-mRNA-processing factor 40 homolog A isoform X5 [Rattus norvegicus]
974 aa protein
accession:XP_008759934.1
Query: pre-mRNA-processing factor 40 homolog A isoform X6
...
pre-mRNA-processing factor 40 homolog A isoform X6 [Rattus norvegicus]
970 aa protein
accession:XP_038960404.1
pre-mRNA-processing factor 40 homolog A isoform X4
...
pre-mRNA-processing factor 40 homolog A isoform X4 [Rattus norvegicus]
988 aa protein
accession:XP_006234226.1
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog A [Danio rerio]
851 aa protein
accession:NP_938170.1
pre-mRNA-processing factor 40 homolog A isoform X3 [Homo sapiens]
976 aa protein
accession:XP_047300898.1
pre-mRNA-processing factor 40 homolog A isoform X1 [Mus musculus]
1016 aa protein
accession:XP_006498256.2
pre-mRNA-processing factor 40 homolog A isoform X5 [Rattus norvegicus]
974 aa protein
accession:XP_008759934.1
pre-mRNA-processing factor 40 homolog A isoform X6 [Rattus norvegicus]
970 aa protein
accession:XP_038960404.1
pre-mRNA-processing factor 40 homolog A isoform X4 [Rattus norvegicus]
988 aa protein
accession:XP_006234226.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2002 | 2002 | 100% | 0.0 | 99.59% | XP_008759934.1 | |
| 2 | 1961 | 1961 | 100% | 0.0 | 94.39% | XP_006498256.2 | |
| 3 | 1927 | 1927 | 100% | 0.0 | 95.90% | XP_047300898.1 | |
| 4 | 970 | 970 | 84% | 0.0 | 72.34% | NP_938170.1 | |
| 5 | 1999 | 1999 | 100% | 0.0 | 98.18% | XP_006234226.1 |