Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_038967883.1
cleavage and polyadenylation specificity factor subunit 3 isoform X1 [Rattus norvegicus]
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Query length:
613 aa
DOMAINS: and other(s) domains
...
cleavage and polyadenylation specificity factor subunit 3, putative
...
cleavage and polyadenylation specificity factor subunit 3, putative [Plasmodium falciparum 3D7]
876 aa protein
accession:XP_001348538.1
Query: cleavage and polyadenylation specificity factor subunit 3 isoform X1
...
cleavage and polyadenylation specificity factor subunit 3 isoform X1 [Rattus norvegicus]
613 aa protein
accession:XP_038967883.1
cleavage and polyadenylation specificity factor 73-I
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cleavage and polyadenylation specificity factor 73-I [Arabidopsis thaliana]
693 aa protein
accession:NP_001321253.1
cleavage and polyadenylation specificity factor subunit 3-I
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cleavage and polyadenylation specificity factor subunit 3-I [Glycine max]
689 aa protein
accession:XP_040863097.1
cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1
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cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1 [Schizosaccharomyces pombe]
757 aa protein
accession:NP_594263.2
cleavage polyadenylation factor subunit YSH1
...
cleavage polyadenylation factor subunit YSH1 [Saccharomyces cerevisiae S288C]
779 aa protein
accession:NP_013379.1
DOMAINS: and other(s) domains
...
cleavage and polyadenylation specificity factor subunit 3, putative [Plasmodium falciparum 3D7]
876 aa protein
accession:XP_001348538.1
cleavage and polyadenylation specificity factor subunit 3 isoform X1 [Rattus norvegicus]
613 aa protein
accession:XP_038967883.1
cleavage and polyadenylation specificity factor 73-I [Arabidopsis thaliana]
693 aa protein
accession:NP_001321253.1
cleavage and polyadenylation specificity factor subunit 3-I [Glycine max]
689 aa protein
accession:XP_040863097.1
cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1 [Schizosaccharomyces pombe]
757 aa protein
accession:NP_594263.2
cleavage polyadenylation factor subunit YSH1 [Saccharomyces cerevisiae S288C]
779 aa protein
accession:NP_013379.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 741 | 741 | 98% | 0.0 | 57.76% | NP_001321253.1 | |
| 2 | 702 | 702 | 97% | 0.0 | 54.26% | XP_040863097.1 | |
| 3 | 660 | 660 | 95% | 0.0 | 51.69% | NP_594263.2 | |
| 4 | 552 | 552 | 93% | 0.0 | 43.38% | NP_013379.1 | |
| 5 | 444 | 444 | 93% | 4e-145 | 36.68% | XP_001348538.1 |