Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_038968895.1
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X3 [Rattus norvegicus]
...
Query length:
587 aa
DOMAINS: and other(s) domains
...
TATA box-binding protein-associated factor RNA polymerase I subunit B
...
TATA box-binding protein-associated factor RNA polymerase I subunit B [Danio rerio]
576 aa protein
accession:NP_001020469.1
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
...
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 [Danio rerio]
486 aa protein
accession:XP_021324082.1
Query: TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X3
...
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X3 [Rattus norvegicus]
587 aa protein
accession:XP_038968895.1
TATA box-binding protein-associated factor RNA polymerase I subunit B
...
TATA box-binding protein-associated factor RNA polymerase I subunit B [Mus musculus]
586 aa protein
accession:NP_065639.2
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
...
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 [Mus musculus]
333 aa protein
accession:XP_006515114.1
DOMAINS: and other(s) domains
...
TATA box-binding protein-associated factor RNA polymerase I subunit B [Danio rerio]
576 aa protein
accession:NP_001020469.1
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 [Danio rerio]
486 aa protein
accession:XP_021324082.1
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X3 [Rattus norvegicus]
587 aa protein
accession:XP_038968895.1
TATA box-binding protein-associated factor RNA polymerase I subunit B [Mus musculus]
586 aa protein
accession:NP_065639.2
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 [Mus musculus]
333 aa protein
accession:XP_006515114.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1065 | 1065 | 100% | 0.0 | 90.46% | NP_065639.2 | |
| 2 | 354 | 354 | 98% | 7e-114 | 34.92% | NP_001020469.1 | |
| 3 | 595 | 595 | 56% | 0.0 | 90.69% | XP_006515114.1 | |
| 4 | 270 | 270 | 81% | 1e-82 | 33.61% | XP_021324082.1 |