Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_039943749.1
transcription factor IIIB 50 kDa subunit [Hirundo rustica]
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Query length:
524 aa
DOMAINS: and other(s) domains
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conserved Plasmodium protein, unknown function
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conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7]
983 aa protein
accession:XP_001347393.2
Cyclin/Brf1-like TBP-binding protein
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Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
557 aa protein
accession:NP_001324771.1
Query: transcription factor IIIB 50 kDa subunit
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transcription factor IIIB 50 kDa subunit [Hirundo rustica]
524 aa protein
accession:XP_039943749.1
transcription factor IIIB 50 kDa subunit isoform X1
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transcription factor IIIB 50 kDa subunit isoform X1 [Rattus norvegicus]
416 aa protein
accession:XP_063131511.1
transcription factor IIIB 50 kDa subunit isoform X1
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transcription factor IIIB 50 kDa subunit isoform X1 [Mus musculus]
286 aa protein
accession:XP_036010133.1
transcription factor IIIB 50 kDa subunit isoform X1
...
transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
DOMAINS: and other(s) domains
...
conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7]
983 aa protein
accession:XP_001347393.2
Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
557 aa protein
accession:NP_001324771.1
transcription factor IIIB 50 kDa subunit [Hirundo rustica]
524 aa protein
accession:XP_039943749.1
transcription factor IIIB 50 kDa subunit isoform X1 [Rattus norvegicus]
416 aa protein
accession:XP_063131511.1
transcription factor IIIB 50 kDa subunit isoform X1 [Mus musculus]
286 aa protein
accession:XP_036010133.1
transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 437 | 497 | 70% | 8e-150 | 63.52% | XP_063131511.1 | |
| 2 | 240 | 304 | 52% | 8e-75 | 61.17% | XP_036010133.1 | |
| 3 | 226 | 279 | 76% | 2e-67 | 36.25% | XP_009303924.1 | |
| 4 | 53.5 | 144 | 21% | 2e-06 | 27.18% | XP_001347393.2 | |
| 5 | 45.8 | 45.8 | 39% | 4e-04 | 22.87% | NP_001324771.1 |