Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_040198984.1 photoreceptor-specific nuclear receptor [Rana temporaria] ... Query length: 406 aa

seven up, isoform B ...

seven up, isoform B [Drosophila melanogaster]

543 aa protein

accession:NP_524325.1

Alignment Sequence Identical proteins

photoreceptor-specific nuclear receptor isoform b ...

photoreceptor-specific nuclear receptor isoform b [Homo sapiens]

410 aa protein

accession:NP_055064.1

Alignment Sequence Identical proteins

photoreceptor-specific nuclear receptor isoform a ...

photoreceptor-specific nuclear receptor isoform a [Homo sapiens]

367 aa protein

accession:NP_057430.1

Alignment Sequence Identical proteins

photoreceptor-specific nuclear receptor ...

photoreceptor-specific nuclear receptor [Mus musculus]

395 aa protein

accession:NP_038736.1

Alignment Sequence Identical proteins

Query: photoreceptor-specific nuclear receptor ...

photoreceptor-specific nuclear receptor [Rana temporaria]

406 aa protein

accession:XP_040198984.1

Sequence Identical proteins

photoreceptor-specific nuclear receptor ...

photoreceptor-specific nuclear receptor [Danio rerio]

426 aa protein

accession:NP_001007369.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001007369.2\|	photoreceptor-specific nuclear receptor [Danio rerio]	588	588	100%	0.0	70.91%	NP_001007369.2
2 Select seq ref\|NP_055064.1\|	photoreceptor-specific nuclear receptor isoform b [Homo sapiens]	548	548	93%	0.0	71.58%	NP_055064.1
3 Select seq ref\|NP_038736.1\|	photoreceptor-specific nuclear receptor [Mus musculus]	531	531	93%	0.0	71.43%	NP_038736.1
4 Select seq ref\|NP_524325.1\|	seven up, isoform B [Drosophila melanogaster]	270	270	91%	5e-84	41.22%	NP_524325.1
5 Select seq ref\|NP_057430.1\|	photoreceptor-specific nuclear receptor isoform a [Homo sapiens]	476	476	82%	2e-167	69.44%	NP_057430.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments