Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_042580120.1 LIM domain transcription factor LMO4a isoform X3 [Cyprinus carpio] ... Query length: 167 aa

LIM domain only protein 3 isoform 1 ...

LIM domain only protein 3 isoform 1 [Mus musculus]

145 aa protein

accession:NP_001398426.1

Alignment Sequence Identical proteins

beadex, isoform F ...

beadex, isoform F [Drosophila melanogaster]

383 aa protein

accession:NP_001259688.2

Alignment Sequence Identical proteins

LIM domain transcription factor LMO4 isoform X1 ...

LIM domain transcription factor LMO4 isoform X1 [Homo sapiens]

165 aa protein

accession:XP_047288897.1

Alignment Sequence Identical proteins

LIM domain transcription factor LMO4 isoform X1 ...

LIM domain transcription factor LMO4 isoform X1 [Rattus norvegicus]

166 aa protein

accession:XP_063138297.1

Alignment Sequence Identical proteins

Query: LIM domain transcription factor LMO4a isoform X3 ...

LIM domain transcription factor LMO4a isoform X3 [Cyprinus carpio]

167 aa protein

accession:XP_042580120.1

Sequence Identical proteins

LIM domain transcription factor LMO4a ...

LIM domain transcription factor LMO4a [Danio rerio]

167 aa protein

accession:NP_817093.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_817093.1\|	LIM domain transcription factor LMO4a [Danio rerio]	341	341	100%	2e-121	98.20%	NP_817093.1
2 Select seq ref\|XP_047288897.1\|	LIM domain transcription factor LMO4 isoform X1 [Homo sapiens]	265	265	100%	2e-91	74.85%	XP_047288897.1
3 Select seq ref\|XP_063138297.1\|	LIM domain transcription factor LMO4 isoform X1 [Rattus norvegicus]	263	263	99%	9e-91	74.70%	XP_063138297.1
4 Select seq ref\|NP_001398426.1\|	LIM domain only protein 3 isoform 1 [Mus musculus]	153	153	77%	2e-47	50.77%	NP_001398426.1
5 Select seq ref\|NP_001259688.2\|	beadex, isoform F [Drosophila melanogaster]	155	155	70%	2e-45	56.78%	NP_001259688.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments