Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_042670158.1
E3 ubiquitin-protein ligase SHPRH isoform X2 [Centrocercus urophasianus]
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Query length:
1692 aa
DOMAINS: and other(s) domains
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ATP-dependent DNA helicase
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ATP-dependent DNA helicase [Schizosaccharomyces pombe]
1375 aa protein
accession:NP_001342916.1
helicase-like transcription factor CHR28 isoform X2
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helicase-like transcription factor CHR28 isoform X2 [Glycine max]
1004 aa protein
accession:XP_040869137.1
transcription termination factor 2 isoform X10
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transcription termination factor 2 isoform X10 [Homo sapiens]
1089 aa protein
accession:XP_047288118.1
RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein
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RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]
1664 aa protein
accession:NP_001325178.1
Query: E3 ubiquitin-protein ligase SHPRH isoform X2
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E3 ubiquitin-protein ligase SHPRH isoform X2 [Centrocercus urophasianus]
1692 aa protein
accession:XP_042670158.1
E3 ubiquitin-protein ligase SHPRH isoform X3
...
E3 ubiquitin-protein ligase SHPRH isoform X3 [Danio rerio]
1644 aa protein
accession:XP_021328750.1
DOMAINS: and other(s) domains
...
ATP-dependent DNA helicase [Schizosaccharomyces pombe]
1375 aa protein
accession:NP_001342916.1
helicase-like transcription factor CHR28 isoform X2 [Glycine max]
1004 aa protein
accession:XP_040869137.1
transcription termination factor 2 isoform X10 [Homo sapiens]
1089 aa protein
accession:XP_047288118.1
RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]
1664 aa protein
accession:NP_001325178.1
E3 ubiquitin-protein ligase SHPRH isoform X2 [Centrocercus urophasianus]
1692 aa protein
accession:XP_042670158.1
E3 ubiquitin-protein ligase SHPRH isoform X3 [Danio rerio]
1644 aa protein
accession:XP_021328750.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2285 | 2285 | 100% | 0.0 | 68.11% | XP_021328750.1 | |
| 2 | 563 | 640 | 73% | 1e-170 | 33.47% | NP_001325178.1 | |
| 3 | 152 | 341 | 44% | 5e-36 | 38.13% | NP_001342916.1 | |
| 4 | 125 | 125 | 17% | 1e-27 | 29.27% | XP_040869137.1 | |
| 5 | 112 | 153 | 18% | 1e-23 | 28.99% | XP_047288118.1 |