Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_042672217.1
DNA-directed RNA polymerase III subunit RPC8 isoform X2 [Centrocercus urophasianus]
...
Query length:
190 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase
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DNA-directed RNA polymerase [Methanothermobacter]
184 aa protein
accession:WP_010875903.1
DNA-directed RNA polymerase III subunit RPC8, putative
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DNA-directed RNA polymerase III subunit RPC8, putative [Plasmodium falciparum 3D7]
186 aa protein
accession:XP_001347734.2
DNA-directed RNA polymerase III complex subunit Rpc25
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DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces pombe]
203 aa protein
accession:NP_001342773.1
DNA-directed RNA polymerase III subunit RPC25
...
DNA-directed RNA polymerase III subunit RPC25 [Saccharomyces cerevisiae S288C]
212 aa protein
accession:NP_012778.1
Query: DNA-directed RNA polymerase III subunit RPC8 isoform X2
...
DNA-directed RNA polymerase III subunit RPC8 isoform X2 [Centrocercus urophasianus]
190 aa protein
accession:XP_042672217.1
DNA-directed RNA polymerase III subunit RPC8 isoform X1
...
DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Homo sapiens]
204 aa protein
accession:XP_047297136.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase [Methanothermobacter]
184 aa protein
accession:WP_010875903.1
DNA-directed RNA polymerase III subunit RPC8, putative [Plasmodium falciparum 3D7]
186 aa protein
accession:XP_001347734.2
DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces pombe]
203 aa protein
accession:NP_001342773.1
DNA-directed RNA polymerase III subunit RPC25 [Saccharomyces cerevisiae S288C]
212 aa protein
accession:NP_012778.1
DNA-directed RNA polymerase III subunit RPC8 isoform X2 [Centrocercus urophasianus]
190 aa protein
accession:XP_042672217.1
DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Homo sapiens]
204 aa protein
accession:XP_047297136.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 330 | 330 | 100% | 6e-116 | 79.61% | XP_047297136.1 | |
| 2 | 154 | 154 | 98% | 6e-47 | 40.00% | NP_001342773.1 | |
| 3 | 153 | 153 | 98% | 2e-46 | 39.25% | NP_012778.1 | |
| 4 | 77.8 | 77.8 | 98% | 3e-17 | 29.56% | XP_001347734.2 | |
| 5 | 61.6 | 61.6 | 50% | 3e-11 | 34.38% | WP_010875903.1 |