Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_047272045.1 large ribosomal subunit protein uL1m isoform X1 [Homo sapiens] ... Query length: 303 aa

39S ribosomal protein L1, mitochondrial ...

39S ribosomal protein L1, mitochondrial [Danio rerio]

316 aa protein

accession:NP_001191062.1

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1m isoform 1 ...

large ribosomal subunit protein uL1m isoform 1 [Mus musculus]

336 aa protein

accession:NP_444388.2

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1m isoform X2 ...

large ribosomal subunit protein uL1m isoform X2 [Mus musculus]

254 aa protein

accession:XP_011247898.1

Alignment Sequence Identical proteins

Query: large ribosomal subunit protein uL1m isoform X1 ...

large ribosomal subunit protein uL1m isoform X1 [Homo sapiens]

303 aa protein

accession:XP_047272045.1

Sequence Identical proteins

large ribosomal subunit protein uL1m precursor ...

large ribosomal subunit protein uL1m precursor [Homo sapiens]

325 aa protein

accession:NP_064621.3

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1m isoform X2 ...

large ribosomal subunit protein uL1m isoform X2 [Homo sapiens]

235 aa protein

accession:XP_047272046.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_064621.3\|	large ribosomal subunit protein uL1m precursor [Homo sapiens]	620	620	100%	0.0	100.00%	NP_064621.3
2 Select seq ref\|NP_444388.2\|	large ribosomal subunit protein uL1m isoform 1 [Mus musculus]	467	467	95%	6e-166	79.32%	NP_444388.2
3 Select seq ref\|NP_001191062.1\|	39S ribosomal protein L1, mitochondrial [Danio rerio]	239	239	82%	2e-76	46.80%	NP_001191062.1
4 Select seq ref\|XP_047272046.1\|	large ribosomal subunit protein uL1m isoform X2 [Homo sapiens]	415	415	66%	7e-147	100.00%	XP_047272046.1
5 Select seq ref\|XP_011247898.1\|	large ribosomal subunit protein uL1m isoform X2 [Mus musculus]	411	411	77%	4e-145	83.40%	XP_011247898.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments