Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_047273270.1
geranylgeranyl transferase type-1 subunit beta isoform X3 [Homo sapiens]
...
Query length:
216 aa
DOMAINS: and other(s) domains
...
protein geranylgeranyltransferase type I subunit CDC43
...
protein geranylgeranyltransferase type I subunit CDC43 [Saccharomyces cerevisiae S288C]
376 aa protein
accession:NP_011360.1
protein geranylgeranyltransferase type II
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protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
339 aa protein
accession:XP_001733035.1
geranylgeranyl transferase type-1 subunit beta isoform X2
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geranylgeranyl transferase type-1 subunit beta isoform X2 [Glycine max]
290 aa protein
accession:XP_025982575.1
geranylgeranyl transferase type-1 subunit beta isoform 4
...
geranylgeranyl transferase type-1 subunit beta isoform 4 [Mus musculus]
326 aa protein
accession:NP_001404711.1
Query: geranylgeranyl transferase type-1 subunit beta isoform X3
...
geranylgeranyl transferase type-1 subunit beta isoform X3 [Homo sapiens]
216 aa protein
accession:XP_047273270.1
geranylgeranyl transferase type-1 subunit beta isoform X3
...
geranylgeranyl transferase type-1 subunit beta isoform X3 [Rattus norvegicus]
220 aa protein
accession:XP_038953069.1
DOMAINS: and other(s) domains
...
protein geranylgeranyltransferase type I subunit CDC43 [Saccharomyces cerevisiae S288C]
376 aa protein
accession:NP_011360.1
protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
339 aa protein
accession:XP_001733035.1
geranylgeranyl transferase type-1 subunit beta isoform X2 [Glycine max]
290 aa protein
accession:XP_025982575.1
geranylgeranyl transferase type-1 subunit beta isoform 4 [Mus musculus]
326 aa protein
accession:NP_001404711.1
geranylgeranyl transferase type-1 subunit beta isoform X3 [Homo sapiens]
216 aa protein
accession:XP_047273270.1
geranylgeranyl transferase type-1 subunit beta isoform X3 [Rattus norvegicus]
220 aa protein
accession:XP_038953069.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 414 | 414 | 94% | 1e-148 | 97.06% | XP_038953069.1 | |
| 2 | 408 | 408 | 94% | 2e-144 | 95.59% | NP_001404711.1 | |
| 3 | 147 | 147 | 83% | 2e-42 | 42.62% | XP_025982575.1 | |
| 4 | 48.1 | 48.1 | 37% | 1e-05 | 33.33% | NP_011360.1 | |
| 5 | 40.8 | 40.8 | 84% | 0.003 | 27.32% | XP_001733035.1 |