Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_048111575.1 39S ribosomal protein L20, mitochondrial [Alosa alosa] ... Query length: 149 aa

Ribosomal protein L20 ...

Ribosomal protein L20 [Arabidopsis thaliana]

126 aa protein

accession:NP_173118.1

Alignment Sequence Identical proteins

mitochondrial ribosomal protein L20 ...

mitochondrial ribosomal protein L20 [Drosophila melanogaster]

150 aa protein

accession:NP_524051.1

Alignment Sequence Identical proteins

large ribosomal subunit protein bL20m precursor ...

large ribosomal subunit protein bL20m precursor [Mus musculus]

149 aa protein

accession:NP_079846.1

Alignment Sequence Identical proteins

large ribosomal subunit protein bL20m isoform 1 ...

large ribosomal subunit protein bL20m isoform 1 [Homo sapiens]

149 aa protein

accession:NP_060441.2

Alignment Sequence Identical proteins

Query: 39S ribosomal protein L20, mitochondrial ...

39S ribosomal protein L20, mitochondrial [Alosa alosa]

149 aa protein

accession:XP_048111575.1

Sequence Identical proteins

large ribosomal subunit protein bL20m ...

large ribosomal subunit protein bL20m [Danio rerio]

149 aa protein

accession:NP_001038824.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001038824.1\|	large ribosomal subunit protein bL20m [Danio rerio]	237	237	100%	1e-80	76.51%	NP_001038824.1
2 Select seq ref\|NP_079846.1\|	large ribosomal subunit protein bL20m precursor [Mus musculus]	205	205	97%	9e-68	68.49%	NP_079846.1
3 Select seq ref\|NP_060441.2\|	large ribosomal subunit protein bL20m isoform 1 [Homo sapiens]	200	200	97%	5e-66	67.12%	NP_060441.2
4 Select seq ref\|NP_524051.1\|	mitochondrial ribosomal protein L20 [Drosophila melanogaster]	125	125	82%	4e-36	46.34%	NP_524051.1
5 Select seq ref\|NP_173118.1\|	Ribosomal protein L20 [Arabidopsis thaliana]	88.2	88.2	66%	6e-22	41.41%	NP_173118.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments