Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_048120724.1
DNA-directed RNA polymerase II subunit RPB9 [Alosa alosa]
...
Query length:
126 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
...
DNA-directed RNA polymerase II complex TFIIS subunit Rpb9 [Schizosaccharomyces pombe]
113 aa protein
accession:NP_594705.1
DNA-directed RNA polymerase II core subunit RPB9
...
DNA-directed RNA polymerase II core subunit RPB9 [Saccharomyces cerevisiae S288C]
122 aa protein
accession:NP_011445.1
RNA polymerase II core subunit
...
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
112 aa protein
accession:XP_647216.1
RNA polymerase II subunit I, isoform C
...
RNA polymerase II subunit I, isoform C [Drosophila melanogaster]
129 aa protein
accession:NP_001287326.1
Query: DNA-directed RNA polymerase II subunit RPB9
...
DNA-directed RNA polymerase II subunit RPB9 [Alosa alosa]
126 aa protein
accession:XP_048120724.1
DNA-directed RNA polymerase II subunit RPB9
...
DNA-directed RNA polymerase II subunit RPB9 [Danio rerio]
126 aa protein
accession:NP_001006013.2
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase II complex TFIIS subunit Rpb9 [Schizosaccharomyces pombe]
113 aa protein
accession:NP_594705.1
DNA-directed RNA polymerase II core subunit RPB9 [Saccharomyces cerevisiae S288C]
122 aa protein
accession:NP_011445.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
112 aa protein
accession:XP_647216.1
RNA polymerase II subunit I, isoform C [Drosophila melanogaster]
129 aa protein
accession:NP_001287326.1
DNA-directed RNA polymerase II subunit RPB9 [Alosa alosa]
126 aa protein
accession:XP_048120724.1
DNA-directed RNA polymerase II subunit RPB9 [Danio rerio]
126 aa protein
accession:NP_001006013.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 266 | 266 | 100% | 5e-93 | 98.41% | NP_001006013.2 | |
| 2 | 206 | 206 | 92% | 3e-69 | 78.63% | NP_001287326.1 | |
| 3 | 127 | 127 | 82% | 3e-38 | 57.69% | XP_647216.1 | |
| 4 | 111 | 111 | 88% | 8e-32 | 45.05% | NP_011445.1 | |
| 5 | 107 | 107 | 89% | 1e-30 | 47.79% | NP_594705.1 |