Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_048588416.1
DNA-directed RNA polymerase I subunit RPA1 isoform X1 [Nematostella vectensis]
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Query length:
1764 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase I core subunit RPA190
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DNA-directed RNA polymerase I core subunit RPA190 [Saccharomyces cerevisiae S288C]
1664 aa protein
accession:NP_014986.3
Query: DNA-directed RNA polymerase I subunit RPA1 isoform X1
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DNA-directed RNA polymerase I subunit RPA1 isoform X1 [Nematostella vectensis]
1764 aa protein
accession:XP_048588416.1
DNA-directed RNA polymerase I subunit RPA1
...
DNA-directed RNA polymerase I subunit RPA1 [Rattus norvegicus]
1716 aa protein
accession:NP_113960.2
DNA-directed RNA polymerase I subunit RPA1
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DNA-directed RNA polymerase I subunit RPA1 [Mus musculus]
1717 aa protein
accession:NP_033114.3
DNA-directed RNA polymerase I subunit RPA1
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DNA-directed RNA polymerase I subunit RPA1 [Homo sapiens]
1720 aa protein
accession:NP_056240.2
DNA-directed RNA polymerase I subunit RPA1
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DNA-directed RNA polymerase I subunit RPA1 [Danio rerio]
1693 aa protein
accession:XP_001922839.2
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase I core subunit RPA190 [Saccharomyces cerevisiae S288C]
1664 aa protein
accession:NP_014986.3
DNA-directed RNA polymerase I subunit RPA1 isoform X1 [Nematostella vectensis]
1764 aa protein
accession:XP_048588416.1
DNA-directed RNA polymerase I subunit RPA1 [Rattus norvegicus]
1716 aa protein
accession:NP_113960.2
DNA-directed RNA polymerase I subunit RPA1 [Mus musculus]
1717 aa protein
accession:NP_033114.3
DNA-directed RNA polymerase I subunit RPA1 [Homo sapiens]
1720 aa protein
accession:NP_056240.2
DNA-directed RNA polymerase I subunit RPA1 [Danio rerio]
1693 aa protein
accession:XP_001922839.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1548 | 1548 | 99% | 0.0 | 47.32% | NP_113960.2 | |
| 2 | 1546 | 1546 | 99% | 0.0 | 47.38% | NP_056240.2 | |
| 3 | 1543 | 1543 | 99% | 0.0 | 46.96% | NP_033114.3 | |
| 4 | 1535 | 1535 | 99% | 0.0 | 46.78% | XP_001922839.2 | |
| 5 | 1177 | 1177 | 99% | 0.0 | 38.93% | NP_014986.3 |