Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_052143382.1
heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Oryza glaberrima]
...
Query length:
342 aa
DOMAINS: and other(s) domains
...
polyprenyl synthetase family protein
...
polyprenyl synthetase family protein [Clostridioides difficile]
295 aa protein
accession:WP_021362460.1
geranylgeranyl diphosphate synthase CrtE
...
geranylgeranyl diphosphate synthase CrtE [Synechocystis salina]
302 aa protein
accession:WP_194018873.1
geranylgeranyl diphosphate synthase CrtE
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geranylgeranyl diphosphate synthase CrtE [Microcystis aeruginosa]
309 aa protein
accession:WP_061431420.1
geranylgeranyl reductase
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geranylgeranyl reductase [Arabidopsis thaliana]
326 aa protein
accession:NP_195558.1
Query: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
...
heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Oryza glaberrima]
342 aa protein
accession:XP_052143382.1
geranylgeranyl pyrophosphate synthase-related protein, chloroplastic-like isoform X1
...
geranylgeranyl pyrophosphate synthase-related protein, chloroplastic-like isoform X1 [Glycine max]
342 aa protein
accession:XP_040873555.1
DOMAINS: and other(s) domains
...
polyprenyl synthetase family protein [Clostridioides difficile]
295 aa protein
accession:WP_021362460.1
geranylgeranyl diphosphate synthase CrtE [Synechocystis salina]
302 aa protein
accession:WP_194018873.1
geranylgeranyl diphosphate synthase CrtE [Microcystis aeruginosa]
309 aa protein
accession:WP_061431420.1
geranylgeranyl reductase [Arabidopsis thaliana]
326 aa protein
accession:NP_195558.1
heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Oryza glaberrima]
342 aa protein
accession:XP_052143382.1
geranylgeranyl pyrophosphate synthase-related protein, chloroplastic-like isoform X1 [Glycine max]
342 aa protein
accession:XP_040873555.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 327 | 327 | 95% | 6e-110 | 51.01% | XP_040873555.1 | |
| 2 | 304 | 304 | 95% | 3e-101 | 49.40% | NP_195558.1 | |
| 3 | 194 | 194 | 85% | 2e-58 | 38.61% | WP_194018873.1 | |
| 4 | 175 | 175 | 86% | 3e-51 | 36.51% | WP_061431420.1 | |
| 5 | 140 | 140 | 82% | 8e-38 | 30.27% | WP_021362460.1 |